Protein–RNA interactions for Protein: P30084

ECHS1, Enoyl-CoA hydratase, mitochondrial, humanhuman

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHS1P30084 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.32■□□□□ 0.84
ECHS1P30084 CDV3P1-201ENST00000471403 739 ntBASIC20.32■□□□□ 0.84
ECHS1P30084 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.32■□□□□ 0.84
ECHS1P30084 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ECHS1P30084 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ECHS1P30084 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
ECHS1P30084 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
ECHS1P30084 AP001271.2-201ENST00000624018 1556 ntBASIC20.32■□□□□ 0.84
ECHS1P30084 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.32■□□□□ 0.84
ECHS1P30084 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ECHS1P30084 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ECHS1P30084 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.32■□□□□ 0.84
ECHS1P30084 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
ECHS1P30084 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ECHS1P30084 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.32■□□□□ 0.84
ECHS1P30084 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ECHS1P30084 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ECHS1P30084 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
ECHS1P30084 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ECHS1P30084 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ECHS1P30084 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.31■□□□□ 0.84
ECHS1P30084 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.31■□□□□ 0.84
ECHS1P30084 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
ECHS1P30084 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.31■□□□□ 0.84
ECHS1P30084 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.31■□□□□ 0.84
ECHS1P30084 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ECHS1P30084 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.31■□□□□ 0.84
ECHS1P30084 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
ECHS1P30084 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.31■□□□□ 0.84
ECHS1P30084 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ECHS1P30084 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ECHS1P30084 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ECHS1P30084 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.31■□□□□ 0.84
ECHS1P30084 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ECHS1P30084 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ECHS1P30084 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ECHS1P30084 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.3■□□□□ 0.84
ECHS1P30084 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.3■□□□□ 0.84
ECHS1P30084 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.3■□□□□ 0.84
ECHS1P30084 AC104581.1-202ENST00000635932 2618 ntBASIC20.3■□□□□ 0.84
ECHS1P30084 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ECHS1P30084 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
ECHS1P30084 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ECHS1P30084 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ECHS1P30084 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ECHS1P30084 AC009113.1-201ENST00000570267 2443 ntBASIC20.3■□□□□ 0.84
ECHS1P30084 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ECHS1P30084 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ECHS1P30084 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ECHS1P30084 PGM5P4-201ENST00000421970 445 ntBASIC20.3■□□□□ 0.84
ECHS1P30084 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.3■□□□□ 0.84
ECHS1P30084 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.3■□□□□ 0.84
ECHS1P30084 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ECHS1P30084 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ECHS1P30084 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ECHS1P30084 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
ECHS1P30084 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ECHS1P30084 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ECHS1P30084 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.3■□□□□ 0.84
ECHS1P30084 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ECHS1P30084 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
ECHS1P30084 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ECHS1P30084 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ECHS1P30084 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ECHS1P30084 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ECHS1P30084 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ECHS1P30084 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ECHS1P30084 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.29■□□□□ 0.84
ECHS1P30084 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.29■□□□□ 0.84
ECHS1P30084 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ECHS1P30084 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ECHS1P30084 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
ECHS1P30084 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ECHS1P30084 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ECHS1P30084 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
ECHS1P30084 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ECHS1P30084 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ECHS1P30084 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.29■□□□□ 0.84
ECHS1P30084 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
ECHS1P30084 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.29■□□□□ 0.84
ECHS1P30084 LINC02228-203ENST00000641970 1355 ntBASIC20.29■□□□□ 0.84
ECHS1P30084 AL161938.1-201ENST00000569833 2180 ntBASIC20.29■□□□□ 0.84
ECHS1P30084 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ECHS1P30084 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
ECHS1P30084 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ECHS1P30084 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
ECHS1P30084 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
ECHS1P30084 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ECHS1P30084 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ECHS1P30084 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
ECHS1P30084 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ECHS1P30084 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ECHS1P30084 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ECHS1P30084 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ECHS1P30084 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ECHS1P30084 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.28■□□□□ 0.84
ECHS1P30084 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ECHS1P30084 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ECHS1P30084 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ECHS1P30084 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms