Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 AC083906.2-201ENST00000511578 360 ntBASIC16.67■□□□□ 0.26
LMO1P25800 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.67■□□□□ 0.26
LMO1P25800 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LMO1P25800 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.67■□□□□ 0.26
LMO1P25800 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.67■□□□□ 0.26
LMO1P25800 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
LMO1P25800 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LMO1P25800 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.67■□□□□ 0.26
LMO1P25800 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LMO1P25800 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.67■□□□□ 0.26
LMO1P25800 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
LMO1P25800 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LMO1P25800 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.67■□□□□ 0.26
LMO1P25800 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LMO1P25800 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LMO1P25800 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LMO1P25800 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LMO1P25800 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
LMO1P25800 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LMO1P25800 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.66■□□□□ 0.26
LMO1P25800 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LMO1P25800 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LMO1P25800 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.66■□□□□ 0.26
LMO1P25800 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LMO1P25800 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LMO1P25800 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
LMO1P25800 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LMO1P25800 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
LMO1P25800 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.66■□□□□ 0.26
LMO1P25800 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LMO1P25800 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LMO1P25800 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
LMO1P25800 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.66■□□□□ 0.26
LMO1P25800 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.66■□□□□ 0.26
LMO1P25800 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
LMO1P25800 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.66■□□□□ 0.26
LMO1P25800 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LMO1P25800 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LMO1P25800 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LMO1P25800 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LMO1P25800 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LMO1P25800 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LMO1P25800 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LMO1P25800 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LMO1P25800 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LMO1P25800 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
LMO1P25800 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LMO1P25800 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LMO1P25800 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.66■□□□□ 0.26
LMO1P25800 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LMO1P25800 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LMO1P25800 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.65■□□□□ 0.26
LMO1P25800 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LMO1P25800 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LMO1P25800 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LMO1P25800 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LMO1P25800 AP001271.2-201ENST00000624018 1556 ntBASIC16.65■□□□□ 0.26
LMO1P25800 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
LMO1P25800 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LMO1P25800 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LMO1P25800 MIPEPP3-201ENST00000412105 444 ntBASIC16.65■□□□□ 0.26
LMO1P25800 AC006970.2-201ENST00000450065 779 ntBASIC16.65■□□□□ 0.26
LMO1P25800 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.65■□□□□ 0.26
LMO1P25800 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.65■□□□□ 0.26
LMO1P25800 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.65■□□□□ 0.26
LMO1P25800 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.65■□□□□ 0.26
LMO1P25800 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LMO1P25800 TNXA-203ENST00000507684 2038 ntBASIC16.65■□□□□ 0.26
LMO1P25800 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LMO1P25800 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LMO1P25800 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.65■□□□□ 0.26
LMO1P25800 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LMO1P25800 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
LMO1P25800 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LMO1P25800 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LMO1P25800 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LMO1P25800 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
LMO1P25800 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.64■□□□□ 0.26
LMO1P25800 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LMO1P25800 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LMO1P25800 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LMO1P25800 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LMO1P25800 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.64■□□□□ 0.25
LMO1P25800 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LMO1P25800 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.64■□□□□ 0.25
LMO1P25800 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.64■□□□□ 0.25
LMO1P25800 NCF1B-203ENST00000435988 1254 ntBASIC16.64■□□□□ 0.25
LMO1P25800 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.64■□□□□ 0.25
LMO1P25800 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.64■□□□□ 0.25
LMO1P25800 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.64■□□□□ 0.25
LMO1P25800 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.64■□□□□ 0.25
LMO1P25800 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.64■□□□□ 0.25
LMO1P25800 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LMO1P25800 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.64■□□□□ 0.25
LMO1P25800 AC116562.4-201ENST00000641316 2276 ntBASIC16.64■□□□□ 0.25
LMO1P25800 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LMO1P25800 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.64■□□□□ 0.25
LMO1P25800 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.64■□□□□ 0.25
LMO1P25800 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LMO1P25800 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms