Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
CAPN3P20807 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN3P20807 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.07■□□□□ 0.64
CAPN3P20807 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.07■□□□□ 0.64
CAPN3P20807 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.07■□□□□ 0.64
CAPN3P20807 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN3P20807 Z82202.1-201ENST00000623446 1880 ntBASIC19.07■□□□□ 0.64
CAPN3P20807 AC087633.2-202ENST00000565166 1439 ntBASIC19.07■□□□□ 0.64
CAPN3P20807 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CAPN3P20807 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN3P20807 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN3P20807 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN3P20807 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.06■□□□□ 0.64
CAPN3P20807 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN3P20807 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN3P20807 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CAPN3P20807 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.06■□□□□ 0.64
CAPN3P20807 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CAPN3P20807 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.06■□□□□ 0.64
CAPN3P20807 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.06■□□□□ 0.64
CAPN3P20807 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN3P20807 KRT18P6-201ENST00000555540 1265 ntBASIC19.06■□□□□ 0.64
CAPN3P20807 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.06■□□□□ 0.64
CAPN3P20807 AC011767.1-201ENST00000617410 1153 ntBASIC19.06■□□□□ 0.64
CAPN3P20807 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.06■□□□□ 0.64
CAPN3P20807 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN3P20807 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.06■□□□□ 0.64
CAPN3P20807 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CAPN3P20807 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN3P20807 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN3P20807 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN3P20807 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN3P20807 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.06■□□□□ 0.64
CAPN3P20807 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.06■□□□□ 0.64
CAPN3P20807 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.06■□□□□ 0.64
CAPN3P20807 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN3P20807 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN3P20807 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.05■□□□□ 0.64
CAPN3P20807 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN3P20807 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
CAPN3P20807 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.05■□□□□ 0.64
CAPN3P20807 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.05■□□□□ 0.64
CAPN3P20807 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.05■□□□□ 0.64
CAPN3P20807 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN3P20807 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.05■□□□□ 0.64
CAPN3P20807 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN3P20807 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
CAPN3P20807 MIR663A-201ENST00000385250 93 ntBASIC19.05■□□□□ 0.64
CAPN3P20807 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.05■□□□□ 0.64
CAPN3P20807 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN3P20807 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.05■□□□□ 0.64
CAPN3P20807 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.05■□□□□ 0.64
CAPN3P20807 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.05■□□□□ 0.64
CAPN3P20807 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.05■□□□□ 0.64
CAPN3P20807 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.05■□□□□ 0.64
CAPN3P20807 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN3P20807 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN3P20807 AC009237.14-201ENST00000609975 1594 ntBASIC19.05■□□□□ 0.64
CAPN3P20807 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN3P20807 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN3P20807 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN3P20807 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN3P20807 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN3P20807 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.04■□□□□ 0.64
CAPN3P20807 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN3P20807 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CAPN3P20807 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN3P20807 PTBP1P-201ENST00000554374 1601 ntBASIC19.04■□□□□ 0.64
CAPN3P20807 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN3P20807 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.04■□□□□ 0.64
CAPN3P20807 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN3P20807 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN3P20807 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.04■□□□□ 0.64
CAPN3P20807 FAM201B-201ENST00000458407 597 ntBASIC19.04■□□□□ 0.64
CAPN3P20807 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN3P20807 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.04■□□□□ 0.64
CAPN3P20807 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN3P20807 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN3P20807 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
CAPN3P20807 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN3P20807 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN3P20807 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN3P20807 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN3P20807 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN3P20807 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN3P20807 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN3P20807 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN3P20807 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.03■□□□□ 0.64
CAPN3P20807 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.03■□□□□ 0.64
CAPN3P20807 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.03■□□□□ 0.64
CAPN3P20807 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CAPN3P20807 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN3P20807 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN3P20807 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN3P20807 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.03■□□□□ 0.64
CAPN3P20807 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.03■□□□□ 0.64
CAPN3P20807 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.03■□□□□ 0.64
CAPN3P20807 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
CAPN3P20807 AL121832.2-201ENST00000610979 668 ntBASIC19.03■□□□□ 0.64
CAPN3P20807 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms