Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.83■□□□□ 0.93
PDGFRAP16234 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.83■□□□□ 0.93
PDGFRAP16234 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.83■□□□□ 0.93
PDGFRAP16234 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDGFRAP16234 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.83■□□□□ 0.93
PDGFRAP16234 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDGFRAP16234 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDGFRAP16234 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDGFRAP16234 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.83■□□□□ 0.93
PDGFRAP16234 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
PDGFRAP16234 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
PDGFRAP16234 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
PDGFRAP16234 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.83■□□□□ 0.93
PDGFRAP16234 AC092368.3-202ENST00000574180 1591 ntBASIC20.83■□□□□ 0.92
PDGFRAP16234 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.83■□□□□ 0.92
PDGFRAP16234 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PDGFRAP16234 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDGFRAP16234 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.82■□□□□ 0.92
PDGFRAP16234 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDGFRAP16234 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PDGFRAP16234 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDGFRAP16234 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDGFRAP16234 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDGFRAP16234 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.82■□□□□ 0.92
PDGFRAP16234 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDGFRAP16234 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDGFRAP16234 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDGFRAP16234 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PDGFRAP16234 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.82■□□□□ 0.92
PDGFRAP16234 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.82■□□□□ 0.92
PDGFRAP16234 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDGFRAP16234 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDGFRAP16234 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.82■□□□□ 0.92
PDGFRAP16234 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.82■□□□□ 0.92
PDGFRAP16234 AC006557.6-201ENST00000623071 864 ntBASIC20.82■□□□□ 0.92
PDGFRAP16234 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDGFRAP16234 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDGFRAP16234 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PDGFRAP16234 TMEM179-206ENST00000616017 1645 ntBASIC20.82■□□□□ 0.92
PDGFRAP16234 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.82■□□□□ 0.92
PDGFRAP16234 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.81■□□□□ 0.92
PDGFRAP16234 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDGFRAP16234 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.81■□□□□ 0.92
PDGFRAP16234 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.81■□□□□ 0.92
PDGFRAP16234 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDGFRAP16234 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDGFRAP16234 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.81■□□□□ 0.92
PDGFRAP16234 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PDGFRAP16234 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.81■□□□□ 0.92
PDGFRAP16234 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.81■□□□□ 0.92
PDGFRAP16234 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.81■□□□□ 0.92
PDGFRAP16234 AC060766.5-201ENST00000590539 871 ntBASIC20.81■□□□□ 0.92
PDGFRAP16234 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDGFRAP16234 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDGFRAP16234 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.81■□□□□ 0.92
PDGFRAP16234 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.8■□□□□ 0.92
PDGFRAP16234 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
PDGFRAP16234 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
PDGFRAP16234 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDGFRAP16234 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDGFRAP16234 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDGFRAP16234 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.8■□□□□ 0.92
PDGFRAP16234 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDGFRAP16234 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.8■□□□□ 0.92
PDGFRAP16234 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PDGFRAP16234 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.8■□□□□ 0.92
PDGFRAP16234 PNMA6B-201ENST00000538162 1200 ntBASIC20.8■□□□□ 0.92
PDGFRAP16234 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.8■□□□□ 0.92
PDGFRAP16234 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.8■□□□□ 0.92
PDGFRAP16234 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDGFRAP16234 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDGFRAP16234 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDGFRAP16234 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.8■□□□□ 0.92
PDGFRAP16234 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.8■□□□□ 0.92
PDGFRAP16234 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDGFRAP16234 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PDGFRAP16234 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.79■□□□□ 0.92
PDGFRAP16234 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDGFRAP16234 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDGFRAP16234 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PDGFRAP16234 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PDGFRAP16234 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.79■□□□□ 0.92
PDGFRAP16234 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.79■□□□□ 0.92
PDGFRAP16234 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.79■□□□□ 0.92
PDGFRAP16234 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.79■□□□□ 0.92
PDGFRAP16234 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.79■□□□□ 0.92
PDGFRAP16234 FAM201B-201ENST00000458407 597 ntBASIC20.79■□□□□ 0.92
PDGFRAP16234 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.79■□□□□ 0.92
PDGFRAP16234 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.79■□□□□ 0.92
PDGFRAP16234 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PDGFRAP16234 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDGFRAP16234 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDGFRAP16234 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
PDGFRAP16234 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.79■□□□□ 0.92
PDGFRAP16234 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.79■□□□□ 0.92
PDGFRAP16234 PHGDH-210ENST00000641115 1638 ntBASIC20.78■□□□□ 0.92
PDGFRAP16234 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDGFRAP16234 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDGFRAP16234 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.78■□□□□ 0.92
PDGFRAP16234 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms