Protein–RNA interactions for Protein: P13646

KRT13, Keratin, type I cytoskeletal 13, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT13P13646 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KRT13P13646 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KRT13P13646 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KRT13P13646 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KRT13P13646 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
KRT13P13646 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
KRT13P13646 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KRT13P13646 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KRT13P13646 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
KRT13P13646 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.69■■□□□ 1.06
KRT13P13646 AC098934.4-201ENST00000564127 592 ntBASIC21.69■■□□□ 1.06
KRT13P13646 MYC-209ENST00000641252 345 ntBASIC21.69■■□□□ 1.06
KRT13P13646 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.69■■□□□ 1.06
KRT13P13646 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.69■■□□□ 1.06
KRT13P13646 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
KRT13P13646 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KRT13P13646 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KRT13P13646 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KRT13P13646 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KRT13P13646 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KRT13P13646 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KRT13P13646 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
KRT13P13646 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
KRT13P13646 AC073210.2-201ENST00000430369 194 ntBASIC21.68■■□□□ 1.06
KRT13P13646 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.68■■□□□ 1.06
KRT13P13646 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.68■■□□□ 1.06
KRT13P13646 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KRT13P13646 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KRT13P13646 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
KRT13P13646 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
KRT13P13646 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
KRT13P13646 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT13P13646 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.67■■□□□ 1.06
KRT13P13646 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.67■■□□□ 1.06
KRT13P13646 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.67■■□□□ 1.06
KRT13P13646 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT13P13646 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT13P13646 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT13P13646 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT13P13646 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KRT13P13646 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KRT13P13646 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.67■■□□□ 1.06
KRT13P13646 HLA-L-209ENST00000420110 1011 ntBASIC21.67■■□□□ 1.06
KRT13P13646 AC069152.1-201ENST00000438030 544 ntBASIC21.67■■□□□ 1.06
KRT13P13646 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.67■■□□□ 1.06
KRT13P13646 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT13P13646 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT13P13646 AC142086.2-201ENST00000569753 217 ntBASIC21.67■■□□□ 1.06
KRT13P13646 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.67■■□□□ 1.06
KRT13P13646 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
KRT13P13646 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.67■■□□□ 1.06
KRT13P13646 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT13P13646 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.67■■□□□ 1.06
KRT13P13646 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT13P13646 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT13P13646 TMEM179-206ENST00000616017 1645 ntBASIC21.66■■□□□ 1.06
KRT13P13646 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KRT13P13646 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.66■■□□□ 1.06
KRT13P13646 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
KRT13P13646 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.66■■□□□ 1.06
KRT13P13646 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT13P13646 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT13P13646 AL355802.2-201ENST00000402069 882 ntBASIC21.66■■□□□ 1.06
KRT13P13646 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.66■■□□□ 1.06
KRT13P13646 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
KRT13P13646 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
KRT13P13646 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.66■■□□□ 1.06
KRT13P13646 AC005829.2-201ENST00000571422 1056 ntBASIC21.66■■□□□ 1.06
KRT13P13646 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT13P13646 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT13P13646 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KRT13P13646 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT13P13646 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.66■■□□□ 1.06
KRT13P13646 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
KRT13P13646 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.66■■□□□ 1.06
KRT13P13646 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT13P13646 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT13P13646 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KRT13P13646 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.65■■□□□ 1.06
KRT13P13646 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT13P13646 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
KRT13P13646 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT13P13646 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT13P13646 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.65■■□□□ 1.06
KRT13P13646 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KRT13P13646 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.65■■□□□ 1.06
KRT13P13646 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KRT13P13646 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT13P13646 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.65■■□□□ 1.06
KRT13P13646 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
KRT13P13646 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KRT13P13646 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.65■■□□□ 1.06
KRT13P13646 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.65■■□□□ 1.06
KRT13P13646 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT13P13646 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT13P13646 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT13P13646 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KRT13P13646 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT13P13646 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
KRT13P13646 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms