Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RARAP10276 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RARAP10276 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RARAP10276 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.82■□□□□ 0.92
RARAP10276 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RARAP10276 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.82■□□□□ 0.92
RARAP10276 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RARAP10276 AL031963.3-201ENST00000606441 850 ntBASIC20.82■□□□□ 0.92
RARAP10276 AL121832.2-201ENST00000610979 668 ntBASIC20.82■□□□□ 0.92
RARAP10276 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RARAP10276 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RARAP10276 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RARAP10276 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RARAP10276 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.81■□□□□ 0.92
RARAP10276 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.81■□□□□ 0.92
RARAP10276 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RARAP10276 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RARAP10276 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RARAP10276 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RARAP10276 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RARAP10276 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RARAP10276 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.81■□□□□ 0.92
RARAP10276 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RARAP10276 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RARAP10276 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RARAP10276 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.81■□□□□ 0.92
RARAP10276 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RARAP10276 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RARAP10276 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RARAP10276 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.8■□□□□ 0.92
RARAP10276 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RARAP10276 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RARAP10276 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RARAP10276 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
RARAP10276 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RARAP10276 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RARAP10276 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RARAP10276 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.8■□□□□ 0.92
RARAP10276 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
RARAP10276 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RARAP10276 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RARAP10276 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RARAP10276 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.8■□□□□ 0.92
RARAP10276 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.8■□□□□ 0.92
RARAP10276 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RARAP10276 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RARAP10276 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
RARAP10276 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RARAP10276 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RARAP10276 KRT8P20-201ENST00000423953 1409 ntBASIC20.79■□□□□ 0.92
RARAP10276 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RARAP10276 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.79■□□□□ 0.92
RARAP10276 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RARAP10276 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.79■□□□□ 0.92
RARAP10276 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RARAP10276 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.79■□□□□ 0.92
RARAP10276 MIPEPP3-201ENST00000412105 444 ntBASIC20.79■□□□□ 0.92
RARAP10276 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.79■□□□□ 0.92
RARAP10276 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RARAP10276 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.79■□□□□ 0.92
RARAP10276 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.79■□□□□ 0.92
RARAP10276 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.79■□□□□ 0.92
RARAP10276 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RARAP10276 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RARAP10276 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
RARAP10276 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RARAP10276 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RARAP10276 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RARAP10276 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RARAP10276 AC018445.3-201ENST00000624177 1945 ntBASIC20.78■□□□□ 0.92
RARAP10276 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RARAP10276 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RARAP10276 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RARAP10276 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.78■□□□□ 0.92
RARAP10276 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RARAP10276 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RARAP10276 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RARAP10276 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.78■□□□□ 0.92
RARAP10276 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.78■□□□□ 0.92
RARAP10276 NCF1B-203ENST00000435988 1254 ntBASIC20.78■□□□□ 0.92
RARAP10276 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.78■□□□□ 0.92
RARAP10276 GUSBP6-202ENST00000438529 1198 ntBASIC20.78■□□□□ 0.92
RARAP10276 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.78■□□□□ 0.92
RARAP10276 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
RARAP10276 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.78■□□□□ 0.92
RARAP10276 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RARAP10276 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RARAP10276 AC098818.2-201ENST00000564925 2320 ntBASIC20.78■□□□□ 0.92
RARAP10276 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.78■□□□□ 0.92
RARAP10276 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.78■□□□□ 0.92
RARAP10276 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RARAP10276 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.77■□□□□ 0.92
RARAP10276 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RARAP10276 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RARAP10276 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.77■□□□□ 0.92
RARAP10276 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RARAP10276 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RARAP10276 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RARAP10276 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RARAP10276 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms