Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC23.93■■□□□ 1.42
CHGBP05060 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
CHGBP05060 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC23.93■■□□□ 1.42
CHGBP05060 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CHGBP05060 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC23.93■■□□□ 1.42
CHGBP05060 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
CHGBP05060 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
CHGBP05060 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC23.93■■□□□ 1.42
CHGBP05060 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC23.92■■□□□ 1.42
CHGBP05060 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC23.92■■□□□ 1.42
CHGBP05060 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC23.92■■□□□ 1.42
CHGBP05060 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CHGBP05060 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CHGBP05060 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
CHGBP05060 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
CHGBP05060 LY6E-205ENST00000519611 635 ntTSL 3 BASIC23.92■■□□□ 1.42
CHGBP05060 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC23.92■■□□□ 1.42
CHGBP05060 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC23.92■■□□□ 1.42
CHGBP05060 AC142381.4-202ENST00000563973 229 ntBASIC23.92■■□□□ 1.42
CHGBP05060 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC23.92■■□□□ 1.42
CHGBP05060 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CHGBP05060 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
CHGBP05060 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CHGBP05060 AC018553.1-201ENST00000616682 1458 ntBASIC23.92■■□□□ 1.42
CHGBP05060 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC23.92■■□□□ 1.42
CHGBP05060 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CHGBP05060 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC23.92■■□□□ 1.42
CHGBP05060 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
CHGBP05060 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CHGBP05060 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
CHGBP05060 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC23.92■■□□□ 1.42
CHGBP05060 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC23.91■■□□□ 1.42
CHGBP05060 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHGBP05060 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHGBP05060 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CHGBP05060 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHGBP05060 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
CHGBP05060 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CHGBP05060 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHGBP05060 F2R-202ENST00000505600 442 ntTSL 2 BASIC23.91■■□□□ 1.42
CHGBP05060 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHGBP05060 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
CHGBP05060 AC124016.1-201ENST00000609552 612 ntBASIC23.91■■□□□ 1.42
CHGBP05060 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
CHGBP05060 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHGBP05060 LBX2-AS1-202ENST00000603175 2083 ntBASIC23.91■■□□□ 1.42
CHGBP05060 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CHGBP05060 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHGBP05060 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
CHGBP05060 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC23.91■■□□□ 1.42
CHGBP05060 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
CHGBP05060 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
CHGBP05060 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHGBP05060 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CHGBP05060 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CHGBP05060 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CHGBP05060 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC23.9■■□□□ 1.42
CHGBP05060 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CHGBP05060 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CHGBP05060 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CHGBP05060 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CHGBP05060 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CHGBP05060 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CHGBP05060 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CHGBP05060 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
CHGBP05060 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
CHGBP05060 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC23.89■■□□□ 1.42
CHGBP05060 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC23.89■■□□□ 1.42
CHGBP05060 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CHGBP05060 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC23.89■■□□□ 1.42
CHGBP05060 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
CHGBP05060 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CHGBP05060 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC23.89■■□□□ 1.41
CHGBP05060 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC23.89■■□□□ 1.41
CHGBP05060 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC23.89■■□□□ 1.41
CHGBP05060 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CHGBP05060 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC23.89■■□□□ 1.41
CHGBP05060 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC23.89■■□□□ 1.41
CHGBP05060 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC23.89■■□□□ 1.41
CHGBP05060 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
CHGBP05060 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
CHGBP05060 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CHGBP05060 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CHGBP05060 KRT16P6-202ENST00000425692 1426 ntBASIC23.89■■□□□ 1.41
CHGBP05060 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CHGBP05060 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CHGBP05060 AC125437.2-201ENST00000625180 2167 ntBASIC23.89■■□□□ 1.41
CHGBP05060 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC23.89■■□□□ 1.41
CHGBP05060 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.41
CHGBP05060 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC23.89■■□□□ 1.41
CHGBP05060 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC23.89■■□□□ 1.41
CHGBP05060 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CHGBP05060 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC23.88■■□□□ 1.41
CHGBP05060 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
CHGBP05060 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC23.88■■□□□ 1.41
CHGBP05060 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC23.88■■□□□ 1.41
CHGBP05060 PHGDH-210ENST00000641115 1638 ntBASIC23.88■■□□□ 1.41
CHGBP05060 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CHGBP05060 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CHGBP05060 AC116351.2-201ENST00000606540 1585 ntBASIC23.88■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms