Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.68■■□□□ 1.06
CHRNA1P02708 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.68■■□□□ 1.06
CHRNA1P02708 NAPSB-206ENST00000562112 1266 ntBASIC21.68■■□□□ 1.06
CHRNA1P02708 AL445675.2-201ENST00000620291 557 ntBASIC21.68■■□□□ 1.06
CHRNA1P02708 AL031985.4-201ENST00000642138 673 ntBASIC21.68■■□□□ 1.06
CHRNA1P02708 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHRNA1P02708 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHRNA1P02708 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHRNA1P02708 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.68■■□□□ 1.06
CHRNA1P02708 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHRNA1P02708 AC092720.2-201ENST00000602388 1665 ntBASIC21.68■■□□□ 1.06
CHRNA1P02708 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.68■■□□□ 1.06
CHRNA1P02708 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
CHRNA1P02708 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHRNA1P02708 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHRNA1P02708 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHRNA1P02708 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CHRNA1P02708 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CHRNA1P02708 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHRNA1P02708 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHRNA1P02708 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.67■■□□□ 1.06
CHRNA1P02708 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.67■■□□□ 1.06
CHRNA1P02708 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHRNA1P02708 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHRNA1P02708 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHRNA1P02708 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHRNA1P02708 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.67■■□□□ 1.06
CHRNA1P02708 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.67■■□□□ 1.06
CHRNA1P02708 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.67■■□□□ 1.06
CHRNA1P02708 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.67■■□□□ 1.06
CHRNA1P02708 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.67■■□□□ 1.06
CHRNA1P02708 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHRNA1P02708 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CHRNA1P02708 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.67■■□□□ 1.06
CHRNA1P02708 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.67■■□□□ 1.06
CHRNA1P02708 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHRNA1P02708 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.67■■□□□ 1.06
CHRNA1P02708 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.67■■□□□ 1.06
CHRNA1P02708 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.66■■□□□ 1.06
CHRNA1P02708 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CHRNA1P02708 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.66■■□□□ 1.06
CHRNA1P02708 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHRNA1P02708 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CHRNA1P02708 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.66■■□□□ 1.06
CHRNA1P02708 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CHRNA1P02708 YBX1P10-201ENST00000444752 975 ntBASIC21.66■■□□□ 1.06
CHRNA1P02708 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CHRNA1P02708 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.66■■□□□ 1.06
CHRNA1P02708 KRT18P16-201ENST00000510337 1294 ntBASIC21.66■■□□□ 1.06
CHRNA1P02708 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.66■■□□□ 1.06
CHRNA1P02708 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.66■■□□□ 1.06
CHRNA1P02708 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.66■■□□□ 1.06
CHRNA1P02708 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CHRNA1P02708 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.66■■□□□ 1.06
CHRNA1P02708 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHRNA1P02708 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHRNA1P02708 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHRNA1P02708 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHRNA1P02708 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHRNA1P02708 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.65■■□□□ 1.06
CHRNA1P02708 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHRNA1P02708 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.65■■□□□ 1.06
CHRNA1P02708 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.65■■□□□ 1.06
CHRNA1P02708 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHRNA1P02708 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.65■■□□□ 1.06
CHRNA1P02708 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHRNA1P02708 KRT18P35-201ENST00000510488 1269 ntBASIC21.65■■□□□ 1.06
CHRNA1P02708 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.65■■□□□ 1.06
CHRNA1P02708 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.65■■□□□ 1.06
CHRNA1P02708 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CHRNA1P02708 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.65■■□□□ 1.06
CHRNA1P02708 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CHRNA1P02708 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHRNA1P02708 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHRNA1P02708 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CHRNA1P02708 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHRNA1P02708 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CHRNA1P02708 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHRNA1P02708 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CHRNA1P02708 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHRNA1P02708 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
CHRNA1P02708 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.64■■□□□ 1.06
CHRNA1P02708 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CHRNA1P02708 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.64■■□□□ 1.06
CHRNA1P02708 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
CHRNA1P02708 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
CHRNA1P02708 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.64■■□□□ 1.05
CHRNA1P02708 AC113347.1-201ENST00000413321 391 ntBASIC21.64■■□□□ 1.05
CHRNA1P02708 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.64■■□□□ 1.05
CHRNA1P02708 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHRNA1P02708 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHRNA1P02708 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.64■■□□□ 1.05
CHRNA1P02708 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHRNA1P02708 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHRNA1P02708 FSCN1P1-201ENST00000568912 1481 ntBASIC21.64■■□□□ 1.05
CHRNA1P02708 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHRNA1P02708 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHRNA1P02708 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHRNA1P02708 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHRNA1P02708 KRT18P22-201ENST00000402024 1347 ntBASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms