Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
COL1A1P02452 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC24.02■■□□□ 1.44
COL1A1P02452 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.43
COL1A1P02452 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL1A1P02452 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL1A1P02452 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL1A1P02452 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC24.01■■□□□ 1.43
COL1A1P02452 AC073195.1-201ENST00000607241 877 ntBASIC24.01■■□□□ 1.43
COL1A1P02452 MIR6786-201ENST00000616843 113 ntBASIC24.01■■□□□ 1.43
COL1A1P02452 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
COL1A1P02452 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
COL1A1P02452 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL1A1P02452 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
COL1A1P02452 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC24.01■■□□□ 1.43
COL1A1P02452 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC24.01■■□□□ 1.43
COL1A1P02452 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL1A1P02452 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
COL1A1P02452 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC24.01■■□□□ 1.43
COL1A1P02452 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
COL1A1P02452 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC24.01■■□□□ 1.43
COL1A1P02452 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL1A1P02452 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
COL1A1P02452 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC24■■□□□ 1.43
COL1A1P02452 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC24■■□□□ 1.43
COL1A1P02452 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL1A1P02452 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC24■■□□□ 1.43
COL1A1P02452 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC24■■□□□ 1.43
COL1A1P02452 P4HB-223ENST00000576390 439 ntTSL 4 BASIC24■■□□□ 1.43
COL1A1P02452 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC24■■□□□ 1.43
COL1A1P02452 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL1A1P02452 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC24■■□□□ 1.43
COL1A1P02452 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
COL1A1P02452 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC24■■□□□ 1.43
COL1A1P02452 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC24■■□□□ 1.43
COL1A1P02452 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC24■■□□□ 1.43
COL1A1P02452 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL1A1P02452 RBM17P1-201ENST00000453646 1190 ntBASIC24■■□□□ 1.43
COL1A1P02452 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC24■■□□□ 1.43
COL1A1P02452 AC004264.1-201ENST00000608354 794 ntBASIC24■■□□□ 1.43
COL1A1P02452 PHGDH-210ENST00000641115 1638 ntBASIC24■■□□□ 1.43
COL1A1P02452 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC24■■□□□ 1.43
COL1A1P02452 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL1A1P02452 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
COL1A1P02452 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL1A1P02452 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC23.99■■□□□ 1.43
COL1A1P02452 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL1A1P02452 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
COL1A1P02452 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
COL1A1P02452 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC23.99■■□□□ 1.43
COL1A1P02452 STK25-204ENST00000405585 1643 ntTSL 2 BASIC23.99■■□□□ 1.43
COL1A1P02452 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
COL1A1P02452 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
COL1A1P02452 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL1A1P02452 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC23.99■■□□□ 1.43
COL1A1P02452 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC23.99■■□□□ 1.43
COL1A1P02452 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC23.99■■□□□ 1.43
COL1A1P02452 REXO1L10P-201ENST00000615707 1290 ntBASIC23.99■■□□□ 1.43
COL1A1P02452 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL1A1P02452 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC23.99■■□□□ 1.43
COL1A1P02452 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL1A1P02452 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
COL1A1P02452 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
COL1A1P02452 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
COL1A1P02452 GLDC-219ENST00000640208 420 ntTSL 2 BASIC23.98■■□□□ 1.43
COL1A1P02452 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL1A1P02452 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL1A1P02452 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
COL1A1P02452 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
COL1A1P02452 AP005212.1-201ENST00000581547 1997 ntBASIC23.97■■□□□ 1.43
COL1A1P02452 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL1A1P02452 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC23.97■■□□□ 1.43
COL1A1P02452 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL1A1P02452 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL1A1P02452 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC23.97■■□□□ 1.43
COL1A1P02452 YBX1P10-201ENST00000444752 975 ntBASIC23.97■■□□□ 1.43
COL1A1P02452 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC23.97■■□□□ 1.43
COL1A1P02452 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
COL1A1P02452 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC23.97■■□□□ 1.43
COL1A1P02452 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC23.97■■□□□ 1.43
COL1A1P02452 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
COL1A1P02452 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL1A1P02452 KRT16P6-202ENST00000425692 1426 ntBASIC23.97■■□□□ 1.43
COL1A1P02452 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.97■■□□□ 1.43
COL1A1P02452 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL1A1P02452 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC23.97■■□□□ 1.43
COL1A1P02452 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL1A1P02452 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL1A1P02452 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
COL1A1P02452 AP006587.1-201ENST00000534129 1502 ntBASIC23.96■■□□□ 1.43
COL1A1P02452 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL1A1P02452 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
COL1A1P02452 DET1-207ENST00000564406 2315 ntTSL 2 BASIC23.96■■□□□ 1.43
COL1A1P02452 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC23.96■■□□□ 1.43
COL1A1P02452 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC23.96■■□□□ 1.43
COL1A1P02452 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC23.96■■□□□ 1.43
COL1A1P02452 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL1A1P02452 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC23.96■■□□□ 1.43
COL1A1P02452 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC23.96■■□□□ 1.43
COL1A1P02452 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC23.96■■□□□ 1.43
COL1A1P02452 KRT8P9-201ENST00000558927 1449 ntBASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms