Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.93■■□□□ 1.1
CLSTN1O94985 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLSTN1O94985 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CLSTN1O94985 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLSTN1O94985 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.92■■□□□ 1.1
CLSTN1O94985 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.92■■□□□ 1.1
CLSTN1O94985 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLSTN1O94985 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
CLSTN1O94985 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLSTN1O94985 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
CLSTN1O94985 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
CLSTN1O94985 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CLSTN1O94985 KRT17P1-201ENST00000399211 1546 ntBASIC21.92■■□□□ 1.1
CLSTN1O94985 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
CLSTN1O94985 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CLSTN1O94985 ID1-201ENST00000376105 1233 ntBASIC21.92■■□□□ 1.1
CLSTN1O94985 AL512625.2-201ENST00000417533 625 ntBASIC21.92■■□□□ 1.1
CLSTN1O94985 TSPY6P-201ENST00000448518 926 ntBASIC21.92■■□□□ 1.1
CLSTN1O94985 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.92■■□□□ 1.1
CLSTN1O94985 AC104771.1-201ENST00000603335 964 ntBASIC21.92■■□□□ 1.1
CLSTN1O94985 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.92■■□□□ 1.1
CLSTN1O94985 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.92■■□□□ 1.1
CLSTN1O94985 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
CLSTN1O94985 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLSTN1O94985 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
CLSTN1O94985 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLSTN1O94985 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
CLSTN1O94985 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CLSTN1O94985 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CLSTN1O94985 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
CLSTN1O94985 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.91■■□□□ 1.1
CLSTN1O94985 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLSTN1O94985 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CLSTN1O94985 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC21.91■■□□□ 1.1
CLSTN1O94985 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLSTN1O94985 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.91■■□□□ 1.1
CLSTN1O94985 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CLSTN1O94985 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
CLSTN1O94985 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CLSTN1O94985 MIPEPP3-201ENST00000412105 444 ntBASIC21.91■■□□□ 1.1
CLSTN1O94985 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.91■■□□□ 1.1
CLSTN1O94985 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.91■■□□□ 1.1
CLSTN1O94985 AC100791.3-201ENST00000617619 330 ntBASIC21.91■■□□□ 1.1
CLSTN1O94985 AC105020.6-201ENST00000621523 1217 ntBASIC21.91■■□□□ 1.1
CLSTN1O94985 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLSTN1O94985 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLSTN1O94985 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.91■■□□□ 1.1
CLSTN1O94985 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CLSTN1O94985 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLSTN1O94985 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.9■■□□□ 1.1
CLSTN1O94985 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLSTN1O94985 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.9■■□□□ 1.1
CLSTN1O94985 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.9■■□□□ 1.1
CLSTN1O94985 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLSTN1O94985 AC092720.2-201ENST00000602388 1665 ntBASIC21.9■■□□□ 1.1
CLSTN1O94985 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
CLSTN1O94985 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLSTN1O94985 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.9■■□□□ 1.1
CLSTN1O94985 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLSTN1O94985 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLSTN1O94985 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLSTN1O94985 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
CLSTN1O94985 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLSTN1O94985 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CLSTN1O94985 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CLSTN1O94985 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CLSTN1O94985 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CLSTN1O94985 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CLSTN1O94985 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CLSTN1O94985 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.89■■□□□ 1.1
CLSTN1O94985 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.89■■□□□ 1.1
CLSTN1O94985 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CLSTN1O94985 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CLSTN1O94985 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CLSTN1O94985 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLSTN1O94985 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.89■■□□□ 1.09
CLSTN1O94985 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLSTN1O94985 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.89■■□□□ 1.09
CLSTN1O94985 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.89■■□□□ 1.09
CLSTN1O94985 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CLSTN1O94985 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CLSTN1O94985 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.09
CLSTN1O94985 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CLSTN1O94985 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CLSTN1O94985 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CLSTN1O94985 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
CLSTN1O94985 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLSTN1O94985 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC21.89■■□□□ 1.09
CLSTN1O94985 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLSTN1O94985 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.89■■□□□ 1.09
CLSTN1O94985 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLSTN1O94985 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLSTN1O94985 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLSTN1O94985 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.88■■□□□ 1.09
CLSTN1O94985 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLSTN1O94985 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLSTN1O94985 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLSTN1O94985 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLSTN1O94985 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.88■■□□□ 1.09
CLSTN1O94985 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms