Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP1O94782 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP1O94782 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
USP1O94782 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP1O94782 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
USP1O94782 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
USP1O94782 AL512625.2-201ENST00000417533 625 ntBASIC20.06■□□□□ 0.8
USP1O94782 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.06■□□□□ 0.8
USP1O94782 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.06■□□□□ 0.8
USP1O94782 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.06■□□□□ 0.8
USP1O94782 AL589743.5-201ENST00000616611 1050 ntBASIC20.06■□□□□ 0.8
USP1O94782 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP1O94782 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP1O94782 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
USP1O94782 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP1O94782 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP1O94782 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP1O94782 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
USP1O94782 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP1O94782 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.05■□□□□ 0.8
USP1O94782 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.05■□□□□ 0.8
USP1O94782 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
USP1O94782 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP1O94782 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP1O94782 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.05■□□□□ 0.8
USP1O94782 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP1O94782 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP1O94782 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
USP1O94782 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.05■□□□□ 0.8
USP1O94782 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP1O94782 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP1O94782 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.05■□□□□ 0.8
USP1O94782 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.05■□□□□ 0.8
USP1O94782 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.05■□□□□ 0.8
USP1O94782 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.05■□□□□ 0.8
USP1O94782 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.05■□□□□ 0.8
USP1O94782 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP1O94782 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
USP1O94782 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP1O94782 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP1O94782 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP1O94782 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP1O94782 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP1O94782 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP1O94782 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP1O94782 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.04■□□□□ 0.8
USP1O94782 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.04■□□□□ 0.8
USP1O94782 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.04■□□□□ 0.8
USP1O94782 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP1O94782 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.04■□□□□ 0.8
USP1O94782 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.04■□□□□ 0.8
USP1O94782 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP1O94782 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP1O94782 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP1O94782 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.04■□□□□ 0.8
USP1O94782 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP1O94782 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP1O94782 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.03■□□□□ 0.8
USP1O94782 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.03■□□□□ 0.8
USP1O94782 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP1O94782 TREX1-205ENST00000625293 1783 ntBASIC20.03■□□□□ 0.8
USP1O94782 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP1O94782 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP1O94782 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP1O94782 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP1O94782 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP1O94782 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP1O94782 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.03■□□□□ 0.8
USP1O94782 AC080038.1-201ENST00000611274 1154 ntBASIC20.03■□□□□ 0.8
USP1O94782 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
USP1O94782 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP1O94782 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP1O94782 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP1O94782 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
USP1O94782 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP1O94782 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP1O94782 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP1O94782 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.03■□□□□ 0.8
USP1O94782 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.03■□□□□ 0.8
USP1O94782 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP1O94782 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP1O94782 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
USP1O94782 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.02■□□□□ 0.8
USP1O94782 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.02■□□□□ 0.8
USP1O94782 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
USP1O94782 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USP1O94782 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP1O94782 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USP1O94782 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
USP1O94782 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
USP1O94782 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP1O94782 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.02■□□□□ 0.8
USP1O94782 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
USP1O94782 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.02■□□□□ 0.8
USP1O94782 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
USP1O94782 C2orf69P4-201ENST00000565394 541 ntBASIC20.02■□□□□ 0.8
USP1O94782 AC005181.1-201ENST00000604782 1256 ntBASIC20.02■□□□□ 0.8
USP1O94782 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP1O94782 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.02■□□□□ 0.8
USP1O94782 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms