Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.04■□□□□ 0.64
SNRNP200O75643 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.04■□□□□ 0.64
SNRNP200O75643 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.04■□□□□ 0.64
SNRNP200O75643 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
SNRNP200O75643 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.04■□□□□ 0.64
SNRNP200O75643 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SNRNP200O75643 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNRNP200O75643 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SNRNP200O75643 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNRNP200O75643 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.04■□□□□ 0.64
SNRNP200O75643 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
SNRNP200O75643 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.03■□□□□ 0.64
SNRNP200O75643 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNRNP200O75643 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.03■□□□□ 0.64
SNRNP200O75643 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNRNP200O75643 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.03■□□□□ 0.64
SNRNP200O75643 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.03■□□□□ 0.64
SNRNP200O75643 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.03■□□□□ 0.64
SNRNP200O75643 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNRNP200O75643 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.03■□□□□ 0.64
SNRNP200O75643 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNRNP200O75643 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNRNP200O75643 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNRNP200O75643 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNRNP200O75643 AP001271.2-201ENST00000624018 1556 ntBASIC19.03■□□□□ 0.64
SNRNP200O75643 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNRNP200O75643 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNRNP200O75643 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNRNP200O75643 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNRNP200O75643 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.03■□□□□ 0.64
SNRNP200O75643 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNRNP200O75643 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SNRNP200O75643 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.02■□□□□ 0.64
SNRNP200O75643 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.02■□□□□ 0.64
SNRNP200O75643 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
SNRNP200O75643 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SNRNP200O75643 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
SNRNP200O75643 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SNRNP200O75643 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.02■□□□□ 0.64
SNRNP200O75643 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.02■□□□□ 0.64
SNRNP200O75643 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.02■□□□□ 0.64
SNRNP200O75643 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SNRNP200O75643 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
SNRNP200O75643 NBPF21P-201ENST00000425093 1451 ntBASIC19.02■□□□□ 0.64
SNRNP200O75643 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNRNP200O75643 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SNRNP200O75643 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SNRNP200O75643 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.02■□□□□ 0.63
SNRNP200O75643 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.02■□□□□ 0.63
SNRNP200O75643 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.02■□□□□ 0.63
SNRNP200O75643 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
SNRNP200O75643 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SNRNP200O75643 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNRNP200O75643 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNRNP200O75643 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNRNP200O75643 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.01■□□□□ 0.63
SNRNP200O75643 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.01■□□□□ 0.63
SNRNP200O75643 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.01■□□□□ 0.63
SNRNP200O75643 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNRNP200O75643 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNRNP200O75643 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.01■□□□□ 0.63
SNRNP200O75643 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.01■□□□□ 0.63
SNRNP200O75643 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.01■□□□□ 0.63
SNRNP200O75643 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.01■□□□□ 0.63
SNRNP200O75643 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.01■□□□□ 0.63
SNRNP200O75643 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNRNP200O75643 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.01■□□□□ 0.63
SNRNP200O75643 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNRNP200O75643 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNRNP200O75643 NUDT16P1-203ENST00000513809 620 ntBASIC19.01■□□□□ 0.63
SNRNP200O75643 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNRNP200O75643 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.01■□□□□ 0.63
SNRNP200O75643 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
SNRNP200O75643 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SNRNP200O75643 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.01■□□□□ 0.63
SNRNP200O75643 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.01■□□□□ 0.63
SNRNP200O75643 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SNRNP200O75643 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNRNP200O75643 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.01■□□□□ 0.63
SNRNP200O75643 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNRNP200O75643 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNRNP200O75643 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19■□□□□ 0.63
SNRNP200O75643 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNRNP200O75643 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
SNRNP200O75643 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SNRNP200O75643 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNRNP200O75643 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNRNP200O75643 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNRNP200O75643 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19■□□□□ 0.63
SNRNP200O75643 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SNRNP200O75643 AC008550.1-201ENST00000511500 884 ntBASIC19■□□□□ 0.63
SNRNP200O75643 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19■□□□□ 0.63
SNRNP200O75643 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19■□□□□ 0.63
SNRNP200O75643 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19■□□□□ 0.63
SNRNP200O75643 AL353708.3-201ENST00000610272 989 ntBASIC19■□□□□ 0.63
SNRNP200O75643 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19■□□□□ 0.63
SNRNP200O75643 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SNRNP200O75643 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
SNRNP200O75643 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNRNP200O75643 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms