Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM3O75382 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
TRIM3O75382 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM3O75382 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM3O75382 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM3O75382 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM3O75382 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
TRIM3O75382 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.46■□□□□ 0.54
TRIM3O75382 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
TRIM3O75382 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM3O75382 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM3O75382 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM3O75382 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TRIM3O75382 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TRIM3O75382 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM3O75382 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM3O75382 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM3O75382 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM3O75382 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM3O75382 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM3O75382 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM3O75382 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM3O75382 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM3O75382 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM3O75382 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.45■□□□□ 0.54
TRIM3O75382 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.45■□□□□ 0.54
TRIM3O75382 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM3O75382 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.45■□□□□ 0.54
TRIM3O75382 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TRIM3O75382 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM3O75382 TMEM191A-211ENST00000637163 1067 ntBASIC18.45■□□□□ 0.54
TRIM3O75382 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM3O75382 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TRIM3O75382 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM3O75382 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM3O75382 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
TRIM3O75382 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM3O75382 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM3O75382 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM3O75382 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM3O75382 AP005212.1-201ENST00000581547 1997 ntBASIC18.44■□□□□ 0.54
TRIM3O75382 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM3O75382 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TRIM3O75382 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TRIM3O75382 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM3O75382 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TRIM3O75382 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM3O75382 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM3O75382 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM3O75382 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM3O75382 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM3O75382 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM3O75382 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM3O75382 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM3O75382 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.44■□□□□ 0.54
TRIM3O75382 AC026366.1-201ENST00000488803 879 ntBASIC18.44■□□□□ 0.54
TRIM3O75382 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM3O75382 AP003097.1-201ENST00000530657 1135 ntBASIC18.44■□□□□ 0.54
TRIM3O75382 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.44■□□□□ 0.54
TRIM3O75382 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM3O75382 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM3O75382 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM3O75382 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM3O75382 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM3O75382 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM3O75382 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM3O75382 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TRIM3O75382 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM3O75382 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
TRIM3O75382 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM3O75382 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM3O75382 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM3O75382 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.43■□□□□ 0.54
TRIM3O75382 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.43■□□□□ 0.54
TRIM3O75382 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM3O75382 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM3O75382 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM3O75382 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM3O75382 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM3O75382 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.43■□□□□ 0.54
TRIM3O75382 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM3O75382 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.43■□□□□ 0.54
TRIM3O75382 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.43■□□□□ 0.54
TRIM3O75382 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM3O75382 ITM2C-210ENST00000620962 501 ntBASIC18.43■□□□□ 0.54
TRIM3O75382 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM3O75382 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM3O75382 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM3O75382 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM3O75382 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM3O75382 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
TRIM3O75382 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM3O75382 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM3O75382 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM3O75382 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM3O75382 BX323043.1-201ENST00000641006 1765 ntBASIC18.42■□□□□ 0.54
TRIM3O75382 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM3O75382 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.42■□□□□ 0.54
TRIM3O75382 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM3O75382 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms