Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GMDSO60547 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
GMDSO60547 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GMDSO60547 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GMDSO60547 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GMDSO60547 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GMDSO60547 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
GMDSO60547 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.51■□□□□ 0.39
GMDSO60547 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GMDSO60547 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.51■□□□□ 0.39
GMDSO60547 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.51■□□□□ 0.39
GMDSO60547 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GMDSO60547 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.51■□□□□ 0.39
GMDSO60547 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GMDSO60547 IKBKGP1-201ENST00000612193 1073 ntBASIC17.51■□□□□ 0.39
GMDSO60547 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.51■□□□□ 0.39
GMDSO60547 AC092437.1-201ENST00000624794 1048 ntBASIC17.51■□□□□ 0.39
GMDSO60547 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GMDSO60547 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.51■□□□□ 0.39
GMDSO60547 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.51■□□□□ 0.39
GMDSO60547 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GMDSO60547 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.51■□□□□ 0.39
GMDSO60547 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.51■□□□□ 0.39
GMDSO60547 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
GMDSO60547 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
GMDSO60547 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GMDSO60547 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GMDSO60547 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
GMDSO60547 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GMDSO60547 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GMDSO60547 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.5■□□□□ 0.39
GMDSO60547 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GMDSO60547 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GMDSO60547 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
GMDSO60547 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
GMDSO60547 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
GMDSO60547 AC004911.1-201ENST00000416316 871 ntBASIC17.5■□□□□ 0.39
GMDSO60547 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.5■□□□□ 0.39
GMDSO60547 CNN2P6-201ENST00000439038 900 ntBASIC17.5■□□□□ 0.39
GMDSO60547 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
GMDSO60547 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.5■□□□□ 0.39
GMDSO60547 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.5■□□□□ 0.39
GMDSO60547 AC080038.1-201ENST00000611274 1154 ntBASIC17.5■□□□□ 0.39
GMDSO60547 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
GMDSO60547 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
GMDSO60547 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
GMDSO60547 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
GMDSO60547 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GMDSO60547 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GMDSO60547 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.5■□□□□ 0.39
GMDSO60547 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GMDSO60547 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.49■□□□□ 0.39
GMDSO60547 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GMDSO60547 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.49■□□□□ 0.39
GMDSO60547 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GMDSO60547 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GMDSO60547 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GMDSO60547 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GMDSO60547 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GMDSO60547 AC068338.2-201ENST00000563278 1430 ntBASIC17.49■□□□□ 0.39
GMDSO60547 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GMDSO60547 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.49■□□□□ 0.39
GMDSO60547 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GMDSO60547 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.49■□□□□ 0.39
GMDSO60547 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.49■□□□□ 0.39
GMDSO60547 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.49■□□□□ 0.39
GMDSO60547 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GMDSO60547 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
GMDSO60547 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GMDSO60547 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GMDSO60547 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.49■□□□□ 0.39
GMDSO60547 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GMDSO60547 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.49■□□□□ 0.39
GMDSO60547 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GMDSO60547 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
GMDSO60547 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.49■□□□□ 0.39
GMDSO60547 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GMDSO60547 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
GMDSO60547 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.48■□□□□ 0.39
GMDSO60547 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.48■□□□□ 0.39
GMDSO60547 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GMDSO60547 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.48■□□□□ 0.39
GMDSO60547 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GMDSO60547 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.48■□□□□ 0.39
GMDSO60547 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.48■□□□□ 0.39
GMDSO60547 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.48■□□□□ 0.39
GMDSO60547 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
GMDSO60547 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GMDSO60547 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
GMDSO60547 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GMDSO60547 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GMDSO60547 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
GMDSO60547 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GMDSO60547 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GMDSO60547 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
GMDSO60547 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GMDSO60547 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.48■□□□□ 0.39
GMDSO60547 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.48■□□□□ 0.39
GMDSO60547 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GMDSO60547 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms