Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PRICKLE3O43900 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.1■□□□□ 0.65
PRICKLE3O43900 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.09■□□□□ 0.65
PRICKLE3O43900 AC018553.1-201ENST00000616682 1458 ntBASIC19.09■□□□□ 0.65
PRICKLE3O43900 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.09■□□□□ 0.65
PRICKLE3O43900 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PRICKLE3O43900 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRICKLE3O43900 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PRICKLE3O43900 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
PRICKLE3O43900 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
PRICKLE3O43900 AC098590.1-201ENST00000468126 897 ntBASIC19.09■□□□□ 0.65
PRICKLE3O43900 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.09■□□□□ 0.65
PRICKLE3O43900 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.09■□□□□ 0.65
PRICKLE3O43900 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
PRICKLE3O43900 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.09■□□□□ 0.65
PRICKLE3O43900 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.09■□□□□ 0.65
PRICKLE3O43900 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PRICKLE3O43900 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRICKLE3O43900 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
PRICKLE3O43900 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRICKLE3O43900 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PRICKLE3O43900 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRICKLE3O43900 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRICKLE3O43900 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRICKLE3O43900 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PRICKLE3O43900 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PRICKLE3O43900 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PRICKLE3O43900 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
PRICKLE3O43900 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PRICKLE3O43900 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
PRICKLE3O43900 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
PRICKLE3O43900 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PRICKLE3O43900 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.08■□□□□ 0.64
PRICKLE3O43900 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.08■□□□□ 0.64
PRICKLE3O43900 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
PRICKLE3O43900 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PRICKLE3O43900 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PRICKLE3O43900 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.08■□□□□ 0.64
PRICKLE3O43900 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.08■□□□□ 0.64
PRICKLE3O43900 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.64
PRICKLE3O43900 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.08■□□□□ 0.64
PRICKLE3O43900 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.08■□□□□ 0.64
PRICKLE3O43900 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.08■□□□□ 0.64
PRICKLE3O43900 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.08■□□□□ 0.64
PRICKLE3O43900 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PRICKLE3O43900 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PRICKLE3O43900 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PRICKLE3O43900 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.08■□□□□ 0.64
PRICKLE3O43900 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.08■□□□□ 0.64
PRICKLE3O43900 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
PRICKLE3O43900 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.08■□□□□ 0.64
PRICKLE3O43900 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
PRICKLE3O43900 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.08■□□□□ 0.64
PRICKLE3O43900 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PRICKLE3O43900 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PRICKLE3O43900 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRICKLE3O43900 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.07■□□□□ 0.64
PRICKLE3O43900 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.07■□□□□ 0.64
PRICKLE3O43900 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRICKLE3O43900 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PRICKLE3O43900 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PRICKLE3O43900 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.07■□□□□ 0.64
PRICKLE3O43900 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRICKLE3O43900 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.07■□□□□ 0.64
PRICKLE3O43900 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRICKLE3O43900 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.07■□□□□ 0.64
PRICKLE3O43900 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PRICKLE3O43900 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRICKLE3O43900 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRICKLE3O43900 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PRICKLE3O43900 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRICKLE3O43900 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRICKLE3O43900 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRICKLE3O43900 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRICKLE3O43900 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PRICKLE3O43900 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PRICKLE3O43900 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRICKLE3O43900 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRICKLE3O43900 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.06■□□□□ 0.64
PRICKLE3O43900 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
PRICKLE3O43900 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
PRICKLE3O43900 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PRICKLE3O43900 AC133681.1-201ENST00000465482 601 ntBASIC19.06■□□□□ 0.64
PRICKLE3O43900 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.06■□□□□ 0.64
PRICKLE3O43900 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.06■□□□□ 0.64
PRICKLE3O43900 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.06■□□□□ 0.64
PRICKLE3O43900 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
PRICKLE3O43900 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.06■□□□□ 0.64
PRICKLE3O43900 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRICKLE3O43900 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.06■□□□□ 0.64
PRICKLE3O43900 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRICKLE3O43900 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRICKLE3O43900 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
PRICKLE3O43900 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.06■□□□□ 0.64
PRICKLE3O43900 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRICKLE3O43900 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
PRICKLE3O43900 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRICKLE3O43900 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRICKLE3O43900 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRICKLE3O43900 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms