Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.16■□□□□ 0.5
IDH3BO43837 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.16■□□□□ 0.5
IDH3BO43837 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
IDH3BO43837 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.16■□□□□ 0.5
IDH3BO43837 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IDH3BO43837 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.16■□□□□ 0.5
IDH3BO43837 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IDH3BO43837 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.16■□□□□ 0.5
IDH3BO43837 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.16■□□□□ 0.5
IDH3BO43837 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.16■□□□□ 0.5
IDH3BO43837 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
IDH3BO43837 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
IDH3BO43837 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
IDH3BO43837 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IDH3BO43837 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IDH3BO43837 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
IDH3BO43837 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
IDH3BO43837 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
IDH3BO43837 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
IDH3BO43837 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.15■□□□□ 0.5
IDH3BO43837 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.15■□□□□ 0.5
IDH3BO43837 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IDH3BO43837 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IDH3BO43837 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.15■□□□□ 0.5
IDH3BO43837 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IDH3BO43837 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IDH3BO43837 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.15■□□□□ 0.5
IDH3BO43837 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
IDH3BO43837 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
IDH3BO43837 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.15■□□□□ 0.5
IDH3BO43837 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
IDH3BO43837 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IDH3BO43837 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
IDH3BO43837 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
IDH3BO43837 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
IDH3BO43837 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
IDH3BO43837 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
IDH3BO43837 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
IDH3BO43837 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
IDH3BO43837 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
IDH3BO43837 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
IDH3BO43837 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
IDH3BO43837 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.15■□□□□ 0.5
IDH3BO43837 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
IDH3BO43837 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IDH3BO43837 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.15■□□□□ 0.5
IDH3BO43837 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.14■□□□□ 0.5
IDH3BO43837 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
IDH3BO43837 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
IDH3BO43837 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
IDH3BO43837 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IDH3BO43837 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
IDH3BO43837 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
IDH3BO43837 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.14■□□□□ 0.49
IDH3BO43837 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
IDH3BO43837 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
IDH3BO43837 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.14■□□□□ 0.49
IDH3BO43837 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
IDH3BO43837 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
IDH3BO43837 DPP3P2-201ENST00000416030 1696 ntBASIC18.14■□□□□ 0.49
IDH3BO43837 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IDH3BO43837 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.14■□□□□ 0.49
IDH3BO43837 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
IDH3BO43837 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IDH3BO43837 NEFHP1-201ENST00000412845 2629 ntBASIC18.14■□□□□ 0.49
IDH3BO43837 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
IDH3BO43837 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
IDH3BO43837 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IDH3BO43837 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.13■□□□□ 0.49
IDH3BO43837 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IDH3BO43837 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IDH3BO43837 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.13■□□□□ 0.49
IDH3BO43837 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
IDH3BO43837 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
IDH3BO43837 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IDH3BO43837 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
IDH3BO43837 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
IDH3BO43837 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.13■□□□□ 0.49
IDH3BO43837 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.13■□□□□ 0.49
IDH3BO43837 MYCNOS-205ENST00000641950 531 ntBASIC18.13■□□□□ 0.49
IDH3BO43837 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IDH3BO43837 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
IDH3BO43837 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IDH3BO43837 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
IDH3BO43837 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
IDH3BO43837 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IDH3BO43837 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.13■□□□□ 0.49
IDH3BO43837 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.13■□□□□ 0.49
IDH3BO43837 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IDH3BO43837 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IDH3BO43837 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
IDH3BO43837 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IDH3BO43837 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
IDH3BO43837 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IDH3BO43837 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IDH3BO43837 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.12■□□□□ 0.49
IDH3BO43837 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IDH3BO43837 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
IDH3BO43837 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IDH3BO43837 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms