Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.1■□□□□ 0.33
PHF1O43189 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHF1O43189 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PHF1O43189 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHF1O43189 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHF1O43189 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PHF1O43189 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHF1O43189 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PHF1O43189 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHF1O43189 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHF1O43189 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHF1O43189 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHF1O43189 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.09■□□□□ 0.33
PHF1O43189 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHF1O43189 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHF1O43189 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHF1O43189 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.09■□□□□ 0.33
PHF1O43189 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHF1O43189 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.09■□□□□ 0.33
PHF1O43189 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.09■□□□□ 0.33
PHF1O43189 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PHF1O43189 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHF1O43189 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PHF1O43189 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PHF1O43189 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.09■□□□□ 0.33
PHF1O43189 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.09■□□□□ 0.33
PHF1O43189 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PHF1O43189 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.09■□□□□ 0.33
PHF1O43189 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.09■□□□□ 0.33
PHF1O43189 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.09■□□□□ 0.33
PHF1O43189 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.09■□□□□ 0.33
PHF1O43189 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.09■□□□□ 0.33
PHF1O43189 FAM197Y4-202ENST00000622692 608 ntBASIC17.09■□□□□ 0.33
PHF1O43189 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.09■□□□□ 0.33
PHF1O43189 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
PHF1O43189 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.09■□□□□ 0.33
PHF1O43189 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHF1O43189 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHF1O43189 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHF1O43189 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.09■□□□□ 0.33
PHF1O43189 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHF1O43189 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PHF1O43189 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHF1O43189 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHF1O43189 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHF1O43189 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PHF1O43189 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.09■□□□□ 0.33
PHF1O43189 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.09■□□□□ 0.33
PHF1O43189 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHF1O43189 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
PHF1O43189 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PHF1O43189 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
PHF1O43189 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PHF1O43189 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PHF1O43189 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.33
PHF1O43189 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PHF1O43189 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHF1O43189 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PHF1O43189 KRT17P1-201ENST00000399211 1546 ntBASIC17.08■□□□□ 0.32
PHF1O43189 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.08■□□□□ 0.32
PHF1O43189 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHF1O43189 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PHF1O43189 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PHF1O43189 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PHF1O43189 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHF1O43189 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHF1O43189 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.08■□□□□ 0.32
PHF1O43189 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.08■□□□□ 0.32
PHF1O43189 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
PHF1O43189 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.08■□□□□ 0.32
PHF1O43189 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.08■□□□□ 0.32
PHF1O43189 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PHF1O43189 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PHF1O43189 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHF1O43189 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHF1O43189 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHF1O43189 AL512408.1-201ENST00000569378 2000 ntBASIC17.08■□□□□ 0.32
PHF1O43189 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHF1O43189 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHF1O43189 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHF1O43189 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHF1O43189 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.07■□□□□ 0.32
PHF1O43189 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHF1O43189 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.07■□□□□ 0.32
PHF1O43189 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.07■□□□□ 0.32
PHF1O43189 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.07■□□□□ 0.32
PHF1O43189 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHF1O43189 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHF1O43189 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
PHF1O43189 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PHF1O43189 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.07■□□□□ 0.32
PHF1O43189 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PHF1O43189 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PHF1O43189 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHF1O43189 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.07■□□□□ 0.32
PHF1O43189 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.07■□□□□ 0.32
PHF1O43189 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PHF1O43189 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PHF1O43189 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.07■□□□□ 0.32
PHF1O43189 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms