Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.7■□□□□ 0.58
RRP8O43159 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RRP8O43159 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RRP8O43159 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
RRP8O43159 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.7■□□□□ 0.58
RRP8O43159 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RRP8O43159 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RRP8O43159 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.7■□□□□ 0.58
RRP8O43159 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RRP8O43159 FAM207BP-201ENST00000447172 505 ntBASIC18.7■□□□□ 0.58
RRP8O43159 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.7■□□□□ 0.58
RRP8O43159 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RRP8O43159 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RRP8O43159 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.7■□□□□ 0.58
RRP8O43159 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RRP8O43159 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.7■□□□□ 0.58
RRP8O43159 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RRP8O43159 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RRP8O43159 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RRP8O43159 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RRP8O43159 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RRP8O43159 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.69■□□□□ 0.58
RRP8O43159 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RRP8O43159 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RRP8O43159 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RRP8O43159 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.69■□□□□ 0.58
RRP8O43159 AL031133.1-201ENST00000406807 723 ntBASIC18.69■□□□□ 0.58
RRP8O43159 HMGA1P5-201ENST00000412453 271 ntBASIC18.69■□□□□ 0.58
RRP8O43159 AL450487.1-201ENST00000426799 995 ntBASIC18.69■□□□□ 0.58
RRP8O43159 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RRP8O43159 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.69■□□□□ 0.58
RRP8O43159 AC097488.1-201ENST00000507834 756 ntBASIC18.69■□□□□ 0.58
RRP8O43159 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RRP8O43159 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RRP8O43159 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RRP8O43159 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RRP8O43159 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RRP8O43159 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RRP8O43159 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RRP8O43159 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RRP8O43159 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RRP8O43159 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RRP8O43159 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.68■□□□□ 0.58
RRP8O43159 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.68■□□□□ 0.58
RRP8O43159 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.68■□□□□ 0.58
RRP8O43159 AC007375.3-201ENST00000600936 2314 ntBASIC18.68■□□□□ 0.58
RRP8O43159 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RRP8O43159 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RRP8O43159 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RRP8O43159 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RRP8O43159 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RRP8O43159 AC117947.1-201ENST00000427448 529 ntBASIC18.68■□□□□ 0.58
RRP8O43159 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.68■□□□□ 0.58
RRP8O43159 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.68■□□□□ 0.58
RRP8O43159 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.68■□□□□ 0.58
RRP8O43159 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.68■□□□□ 0.58
RRP8O43159 MYC-208ENST00000641036 567 ntBASIC18.68■□□□□ 0.58
RRP8O43159 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RRP8O43159 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RRP8O43159 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RRP8O43159 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.68■□□□□ 0.58
RRP8O43159 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RRP8O43159 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RRP8O43159 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.67■□□□□ 0.58
RRP8O43159 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
RRP8O43159 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.67■□□□□ 0.58
RRP8O43159 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.67■□□□□ 0.58
RRP8O43159 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RRP8O43159 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.67■□□□□ 0.58
RRP8O43159 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.67■□□□□ 0.58
RRP8O43159 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.67■□□□□ 0.58
RRP8O43159 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.67■□□□□ 0.58
RRP8O43159 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.67■□□□□ 0.58
RRP8O43159 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
RRP8O43159 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RRP8O43159 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RRP8O43159 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RRP8O43159 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.67■□□□□ 0.58
RRP8O43159 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RRP8O43159 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.67■□□□□ 0.58
RRP8O43159 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
RRP8O43159 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RRP8O43159 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
RRP8O43159 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RRP8O43159 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RRP8O43159 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RRP8O43159 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RRP8O43159 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
RRP8O43159 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RRP8O43159 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RRP8O43159 AC091390.4-202ENST00000476426 537 ntBASIC18.66■□□□□ 0.58
RRP8O43159 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.66■□□□□ 0.58
RRP8O43159 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.66■□□□□ 0.58
RRP8O43159 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.66■□□□□ 0.58
RRP8O43159 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.66■□□□□ 0.58
RRP8O43159 AC139887.4-201ENST00000607877 719 ntBASIC18.66■□□□□ 0.58
RRP8O43159 FAM87A-204ENST00000613235 858 ntBASIC18.66■□□□□ 0.58
RRP8O43159 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RRP8O43159 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RRP8O43159 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms