Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NDUFA1O15239 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NDUFA1O15239 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC13.56□□□□□ -0.24
NDUFA1O15239 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NDUFA1O15239 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC13.56□□□□□ -0.24
NDUFA1O15239 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC13.56□□□□□ -0.24
NDUFA1O15239 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
NDUFA1O15239 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NDUFA1O15239 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC13.56□□□□□ -0.24
NDUFA1O15239 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC13.56□□□□□ -0.24
NDUFA1O15239 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NDUFA1O15239 RHOF-204ENST00000537265 699 ntTSL 2 BASIC13.56□□□□□ -0.24
NDUFA1O15239 AC138907.5-202ENST00000569484 235 ntBASIC13.56□□□□□ -0.24
NDUFA1O15239 MIR6084-201ENST00000622012 110 ntBASIC13.56□□□□□ -0.24
NDUFA1O15239 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NDUFA1O15239 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NDUFA1O15239 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NDUFA1O15239 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NDUFA1O15239 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
NDUFA1O15239 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NDUFA1O15239 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NDUFA1O15239 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NDUFA1O15239 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NDUFA1O15239 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NDUFA1O15239 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NDUFA1O15239 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NDUFA1O15239 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
NDUFA1O15239 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
NDUFA1O15239 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
NDUFA1O15239 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NDUFA1O15239 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NDUFA1O15239 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NDUFA1O15239 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NDUFA1O15239 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NDUFA1O15239 IRS3P-201ENST00000223076 1006 ntBASIC13.55□□□□□ -0.24
NDUFA1O15239 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NDUFA1O15239 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC13.55□□□□□ -0.24
NDUFA1O15239 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
NDUFA1O15239 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NDUFA1O15239 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC13.55□□□□□ -0.24
NDUFA1O15239 SERP1-208ENST00000491660 830 ntTSL 2 BASIC13.55□□□□□ -0.24
NDUFA1O15239 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC13.55□□□□□ -0.24
NDUFA1O15239 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC13.55□□□□□ -0.24
NDUFA1O15239 PTGES2-AS1-201ENST00000443493 2100 ntBASIC13.55□□□□□ -0.24
NDUFA1O15239 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
NDUFA1O15239 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NDUFA1O15239 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
NDUFA1O15239 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
NDUFA1O15239 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
NDUFA1O15239 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
NDUFA1O15239 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NDUFA1O15239 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
NDUFA1O15239 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC13.55□□□□□ -0.24
NDUFA1O15239 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NDUFA1O15239 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC13.55□□□□□ -0.24
NDUFA1O15239 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
NDUFA1O15239 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
NDUFA1O15239 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
NDUFA1O15239 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
NDUFA1O15239 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NDUFA1O15239 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
NDUFA1O15239 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NDUFA1O15239 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NDUFA1O15239 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NDUFA1O15239 BX119927.1-201ENST00000636596 1552 ntBASIC13.54□□□□□ -0.24
NDUFA1O15239 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NDUFA1O15239 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC13.54□□□□□ -0.24
NDUFA1O15239 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NDUFA1O15239 HYI-206ENST00000372434 1025 ntTSL 5 BASIC13.54□□□□□ -0.24
NDUFA1O15239 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NDUFA1O15239 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NDUFA1O15239 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC13.54□□□□□ -0.24
NDUFA1O15239 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC13.54□□□□□ -0.24
NDUFA1O15239 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC13.54□□□□□ -0.24
NDUFA1O15239 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
NDUFA1O15239 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NDUFA1O15239 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC13.54□□□□□ -0.24
NDUFA1O15239 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NDUFA1O15239 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
NDUFA1O15239 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NDUFA1O15239 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC13.54□□□□□ -0.24
NDUFA1O15239 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
NDUFA1O15239 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NDUFA1O15239 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NDUFA1O15239 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
NDUFA1O15239 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC13.54□□□□□ -0.24
NDUFA1O15239 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
NDUFA1O15239 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NDUFA1O15239 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NDUFA1O15239 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NDUFA1O15239 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC13.53□□□□□ -0.24
NDUFA1O15239 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NDUFA1O15239 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NDUFA1O15239 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NDUFA1O15239 AL138781.2-201ENST00000617896 1843 ntBASIC13.53□□□□□ -0.24
NDUFA1O15239 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NDUFA1O15239 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NDUFA1O15239 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NDUFA1O15239 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NDUFA1O15239 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms