Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TO15178 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TO15178 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TO15178 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TO15178 AL121906.2-201ENST00000621597 723 ntBASIC18.29■□□□□ 0.52
TO15178 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
TO15178 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TO15178 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.29■□□□□ 0.52
TO15178 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TO15178 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TO15178 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
TO15178 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.29■□□□□ 0.52
TO15178 AC009237.14-201ENST00000609975 1594 ntBASIC18.29■□□□□ 0.52
TO15178 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.29■□□□□ 0.52
TO15178 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TO15178 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.29■□□□□ 0.52
TO15178 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TO15178 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TO15178 AC124283.5-201ENST00000624661 1809 ntBASIC18.28■□□□□ 0.52
TO15178 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TO15178 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
TO15178 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TO15178 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.28■□□□□ 0.52
TO15178 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TO15178 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TO15178 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TO15178 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TO15178 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TO15178 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.28■□□□□ 0.52
TO15178 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.28■□□□□ 0.52
TO15178 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.28■□□□□ 0.52
TO15178 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.28■□□□□ 0.52
TO15178 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TO15178 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TO15178 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TO15178 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.28■□□□□ 0.52
TO15178 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TO15178 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TO15178 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.28■□□□□ 0.52
TO15178 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TO15178 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TO15178 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TO15178 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.28■□□□□ 0.52
TO15178 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TO15178 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
TO15178 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TO15178 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TO15178 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.27■□□□□ 0.52
TO15178 AC018553.1-201ENST00000616682 1458 ntBASIC18.27■□□□□ 0.52
TO15178 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TO15178 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
TO15178 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.27■□□□□ 0.52
TO15178 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TO15178 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TO15178 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.27■□□□□ 0.52
TO15178 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TO15178 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TO15178 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.27■□□□□ 0.52
TO15178 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.27■□□□□ 0.52
TO15178 AC069544.1-201ENST00000609399 999 ntBASIC18.27■□□□□ 0.52
TO15178 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TO15178 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TO15178 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TO15178 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TO15178 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
TO15178 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.27■□□□□ 0.52
TO15178 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TO15178 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
TO15178 TMEM179-206ENST00000616017 1645 ntBASIC18.27■□□□□ 0.51
TO15178 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TO15178 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TO15178 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TO15178 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TO15178 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TO15178 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.26■□□□□ 0.51
TO15178 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TO15178 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TO15178 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TO15178 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TO15178 TFP1-202ENST00000475455 1573 ntBASIC18.26■□□□□ 0.51
TO15178 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TO15178 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TO15178 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TO15178 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TO15178 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
TO15178 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TO15178 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.26■□□□□ 0.51
TO15178 TSPY20P-201ENST00000450910 630 ntBASIC18.26■□□□□ 0.51
TO15178 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.26■□□□□ 0.51
TO15178 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
TO15178 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TO15178 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.26■□□□□ 0.51
TO15178 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.26■□□□□ 0.51
TO15178 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TO15178 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TO15178 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TO15178 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TO15178 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TO15178 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TO15178 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms