Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.27■□□□□ 0.68
UBFD1O14562 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBFD1O14562 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
UBFD1O14562 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
UBFD1O14562 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
UBFD1O14562 AP001271.2-201ENST00000624018 1556 ntBASIC19.27■□□□□ 0.67
UBFD1O14562 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
UBFD1O14562 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
UBFD1O14562 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
UBFD1O14562 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
UBFD1O14562 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.27■□□□□ 0.67
UBFD1O14562 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBFD1O14562 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBFD1O14562 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
UBFD1O14562 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBFD1O14562 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBFD1O14562 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBFD1O14562 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
UBFD1O14562 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBFD1O14562 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBFD1O14562 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.26■□□□□ 0.67
UBFD1O14562 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
UBFD1O14562 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBFD1O14562 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBFD1O14562 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBFD1O14562 TNXA-203ENST00000507684 2038 ntBASIC19.26■□□□□ 0.67
UBFD1O14562 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.26■□□□□ 0.67
UBFD1O14562 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBFD1O14562 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBFD1O14562 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.26■□□□□ 0.67
UBFD1O14562 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.26■□□□□ 0.67
UBFD1O14562 AC092666.2-201ENST00000613287 246 ntBASIC19.26■□□□□ 0.67
UBFD1O14562 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.26■□□□□ 0.67
UBFD1O14562 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.26■□□□□ 0.67
UBFD1O14562 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBFD1O14562 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
UBFD1O14562 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBFD1O14562 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBFD1O14562 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBFD1O14562 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBFD1O14562 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.25■□□□□ 0.67
UBFD1O14562 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.25■□□□□ 0.67
UBFD1O14562 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBFD1O14562 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBFD1O14562 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
UBFD1O14562 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.25■□□□□ 0.67
UBFD1O14562 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
UBFD1O14562 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBFD1O14562 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
UBFD1O14562 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBFD1O14562 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBFD1O14562 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBFD1O14562 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.25■□□□□ 0.67
UBFD1O14562 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
UBFD1O14562 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBFD1O14562 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBFD1O14562 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBFD1O14562 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBFD1O14562 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBFD1O14562 AC010980.2-201ENST00000587099 1412 ntBASIC19.25■□□□□ 0.67
UBFD1O14562 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBFD1O14562 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
UBFD1O14562 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.24■□□□□ 0.67
UBFD1O14562 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBFD1O14562 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
UBFD1O14562 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBFD1O14562 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBFD1O14562 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBFD1O14562 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBFD1O14562 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBFD1O14562 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.24■□□□□ 0.67
UBFD1O14562 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBFD1O14562 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.24■□□□□ 0.67
UBFD1O14562 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.24■□□□□ 0.67
UBFD1O14562 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBFD1O14562 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBFD1O14562 AC069236.1-201ENST00000604339 616 ntBASIC19.24■□□□□ 0.67
UBFD1O14562 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.24■□□□□ 0.67
UBFD1O14562 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBFD1O14562 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBFD1O14562 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBFD1O14562 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBFD1O14562 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.24■□□□□ 0.67
UBFD1O14562 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
UBFD1O14562 KRT17P1-201ENST00000399211 1546 ntBASIC19.24■□□□□ 0.67
UBFD1O14562 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBFD1O14562 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
UBFD1O14562 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBFD1O14562 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.24■□□□□ 0.67
UBFD1O14562 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
UBFD1O14562 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.23■□□□□ 0.67
UBFD1O14562 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBFD1O14562 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.23■□□□□ 0.67
UBFD1O14562 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBFD1O14562 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
UBFD1O14562 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.23■□□□□ 0.67
UBFD1O14562 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.23■□□□□ 0.67
UBFD1O14562 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBFD1O14562 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.23■□□□□ 0.67
UBFD1O14562 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms