Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.94■□□□□ 0.62
RTCAO00442 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RTCAO00442 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.94■□□□□ 0.62
RTCAO00442 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RTCAO00442 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTCAO00442 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTCAO00442 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTCAO00442 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.93■□□□□ 0.62
RTCAO00442 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTCAO00442 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.93■□□□□ 0.62
RTCAO00442 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RTCAO00442 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RTCAO00442 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTCAO00442 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTCAO00442 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.93■□□□□ 0.62
RTCAO00442 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.93■□□□□ 0.62
RTCAO00442 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.93■□□□□ 0.62
RTCAO00442 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.93■□□□□ 0.62
RTCAO00442 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.93■□□□□ 0.62
RTCAO00442 AC005829.2-201ENST00000571422 1056 ntBASIC18.93■□□□□ 0.62
RTCAO00442 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.93■□□□□ 0.62
RTCAO00442 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTCAO00442 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
RTCAO00442 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTCAO00442 HLA-B-256ENST00000639848 1089 ntBASIC18.93■□□□□ 0.62
RTCAO00442 AC125437.2-201ENST00000625180 2167 ntBASIC18.93■□□□□ 0.62
RTCAO00442 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RTCAO00442 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
RTCAO00442 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTCAO00442 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTCAO00442 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTCAO00442 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RTCAO00442 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTCAO00442 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTCAO00442 AL390719.1-204ENST00000412397 1219 ntBASIC18.92■□□□□ 0.62
RTCAO00442 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTCAO00442 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTCAO00442 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.92■□□□□ 0.62
RTCAO00442 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
RTCAO00442 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTCAO00442 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RTCAO00442 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.92■□□□□ 0.62
RTCAO00442 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.92■□□□□ 0.62
RTCAO00442 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTCAO00442 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTCAO00442 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTCAO00442 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.92■□□□□ 0.62
RTCAO00442 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTCAO00442 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTCAO00442 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.91■□□□□ 0.62
RTCAO00442 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTCAO00442 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.91■□□□□ 0.62
RTCAO00442 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.91■□□□□ 0.62
RTCAO00442 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.91■□□□□ 0.62
RTCAO00442 PNMA6B-201ENST00000538162 1200 ntBASIC18.91■□□□□ 0.62
RTCAO00442 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.91■□□□□ 0.62
RTCAO00442 AC060766.5-201ENST00000590539 871 ntBASIC18.91■□□□□ 0.62
RTCAO00442 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTCAO00442 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.91■□□□□ 0.62
RTCAO00442 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTCAO00442 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RTCAO00442 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.91■□□□□ 0.62
RTCAO00442 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RTCAO00442 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTCAO00442 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.91■□□□□ 0.62
RTCAO00442 AC124283.5-201ENST00000624661 1809 ntBASIC18.9■□□□□ 0.62
RTCAO00442 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.9■□□□□ 0.62
RTCAO00442 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTCAO00442 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTCAO00442 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.9■□□□□ 0.62
RTCAO00442 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTCAO00442 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RTCAO00442 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.9■□□□□ 0.62
RTCAO00442 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RTCAO00442 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTCAO00442 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.9■□□□□ 0.62
RTCAO00442 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTCAO00442 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTCAO00442 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.9■□□□□ 0.62
RTCAO00442 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.9■□□□□ 0.62
RTCAO00442 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.9■□□□□ 0.62
RTCAO00442 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.9■□□□□ 0.62
RTCAO00442 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.9■□□□□ 0.62
RTCAO00442 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTCAO00442 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RTCAO00442 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTCAO00442 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTCAO00442 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTCAO00442 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTCAO00442 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RTCAO00442 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTCAO00442 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTCAO00442 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTCAO00442 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTCAO00442 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
RTCAO00442 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.89■□□□□ 0.61
RTCAO00442 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.89■□□□□ 0.61
RTCAO00442 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTCAO00442 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RTCAO00442 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms