Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CGB1A6NKQ9 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CGB1A6NKQ9 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CGB1A6NKQ9 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CGB1A6NKQ9 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CGB1A6NKQ9 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC15.86■□□□□ 0.13
CGB1A6NKQ9 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CGB1A6NKQ9 IKBKGP1-201ENST00000612193 1073 ntBASIC15.86■□□□□ 0.13
CGB1A6NKQ9 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC15.86■□□□□ 0.13
CGB1A6NKQ9 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CGB1A6NKQ9 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CGB1A6NKQ9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CGB1A6NKQ9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC15.86■□□□□ 0.13
CGB1A6NKQ9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.86■□□□□ 0.13
CGB1A6NKQ9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CGB1A6NKQ9 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CGB1A6NKQ9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC15.86■□□□□ 0.13
CGB1A6NKQ9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.86■□□□□ 0.13
CGB1A6NKQ9 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CGB1A6NKQ9 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CGB1A6NKQ9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CGB1A6NKQ9 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CGB1A6NKQ9 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CGB1A6NKQ9 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 AL031963.3-201ENST00000606441 850 ntBASIC15.85■□□□□ 0.13
CGB1A6NKQ9 MDK-213ENST00000617138 635 ntTSL 2 BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 AC008694.1-202ENST00000636953 945 ntBASIC15.85■□□□□ 0.13
CGB1A6NKQ9 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 TREX1-205ENST00000625293 1783 ntBASIC15.85■□□□□ 0.13
CGB1A6NKQ9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CGB1A6NKQ9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.84■□□□□ 0.13
CGB1A6NKQ9 AC116562.4-201ENST00000641316 2276 ntBASIC15.84■□□□□ 0.13
CGB1A6NKQ9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CGB1A6NKQ9 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
CGB1A6NKQ9 METTL26-203ENST00000397664 604 ntTSL 2 BASIC15.84■□□□□ 0.13
CGB1A6NKQ9 AL512625.2-201ENST00000417533 625 ntBASIC15.84■□□□□ 0.13
CGB1A6NKQ9 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15.84■□□□□ 0.13
CGB1A6NKQ9 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC15.84■□□□□ 0.13
CGB1A6NKQ9 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC15.84■□□□□ 0.13
CGB1A6NKQ9 AC005181.1-201ENST00000604782 1256 ntBASIC15.84■□□□□ 0.13
CGB1A6NKQ9 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC15.84■□□□□ 0.13
CGB1A6NKQ9 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC15.84■□□□□ 0.13
CGB1A6NKQ9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
CGB1A6NKQ9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CGB1A6NKQ9 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CGB1A6NKQ9 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CGB1A6NKQ9 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.84■□□□□ 0.13
CGB1A6NKQ9 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CGB1A6NKQ9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CGB1A6NKQ9 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CGB1A6NKQ9 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CGB1A6NKQ9 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CGB1A6NKQ9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC15.84■□□□□ 0.13
CGB1A6NKQ9 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CGB1A6NKQ9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CGB1A6NKQ9 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CGB1A6NKQ9 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CGB1A6NKQ9 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
CGB1A6NKQ9 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CGB1A6NKQ9 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CGB1A6NKQ9 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CGB1A6NKQ9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CGB1A6NKQ9 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CGB1A6NKQ9 AL050303.2-201ENST00000619798 666 ntBASIC15.83■□□□□ 0.12
CGB1A6NKQ9 AC073111.5-205ENST00000641717 521 ntBASIC15.83■□□□□ 0.12
CGB1A6NKQ9 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CGB1A6NKQ9 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.83■□□□□ 0.12
CGB1A6NKQ9 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CGB1A6NKQ9 KRT8P20-201ENST00000423953 1409 ntBASIC15.83■□□□□ 0.12
CGB1A6NKQ9 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 1172.8 ms