Protein–RNA interactions for Protein: A6NKG5

RTL1, Retrotransposon-like protein 1, humanhuman

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1A6NKG5 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC26.46■■□□□ 1.83
RTL1A6NKG5 B3GAT3P1-201ENST00000471720 806 ntBASIC26.46■■□□□ 1.83
RTL1A6NKG5 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
RTL1A6NKG5 DUT-205ENST00000558813 769 ntTSL 2 BASIC26.46■■□□□ 1.83
RTL1A6NKG5 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC26.46■■□□□ 1.83
RTL1A6NKG5 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
RTL1A6NKG5 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC26.46■■□□□ 1.83
RTL1A6NKG5 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
RTL1A6NKG5 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
RTL1A6NKG5 CLDN5-201ENST00000403084 2357 ntBASIC26.46■■□□□ 1.83
RTL1A6NKG5 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC26.46■■□□□ 1.83
RTL1A6NKG5 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RTL1A6NKG5 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
RTL1A6NKG5 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
RTL1A6NKG5 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
RTL1A6NKG5 AC004980.1-204ENST00000429707 299 ntBASIC26.46■■□□□ 1.83
RTL1A6NKG5 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC26.46■■□□□ 1.83
RTL1A6NKG5 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RTL1A6NKG5 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC26.46■■□□□ 1.83
RTL1A6NKG5 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC26.45■■□□□ 1.83
RTL1A6NKG5 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.83
RTL1A6NKG5 FSCN1P1-201ENST00000568912 1481 ntBASIC26.45■■□□□ 1.82
RTL1A6NKG5 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC26.45■■□□□ 1.82
RTL1A6NKG5 LINC01568-207ENST00000641790 1380 ntBASIC26.45■■□□□ 1.82
RTL1A6NKG5 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RTL1A6NKG5 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
RTL1A6NKG5 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC26.45■■□□□ 1.82
RTL1A6NKG5 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC26.45■■□□□ 1.82
RTL1A6NKG5 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC26.45■■□□□ 1.82
RTL1A6NKG5 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC26.45■■□□□ 1.82
RTL1A6NKG5 AC005363.2-201ENST00000618631 242 ntBASIC26.45■■□□□ 1.82
RTL1A6NKG5 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC26.45■■□□□ 1.82
RTL1A6NKG5 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
RTL1A6NKG5 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RTL1A6NKG5 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
RTL1A6NKG5 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
RTL1A6NKG5 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
RTL1A6NKG5 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC26.44■■□□□ 1.82
RTL1A6NKG5 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC26.44■■□□□ 1.82
RTL1A6NKG5 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC26.44■■□□□ 1.82
RTL1A6NKG5 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
RTL1A6NKG5 CRAT-202ENST00000393384 973 ntTSL 2 BASIC26.44■■□□□ 1.82
RTL1A6NKG5 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
RTL1A6NKG5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC26.44■■□□□ 1.82
RTL1A6NKG5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC26.44■■□□□ 1.82
RTL1A6NKG5 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RTL1A6NKG5 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
RTL1A6NKG5 GOLGA6L3-201ENST00000507199 1679 ntBASIC26.43■■□□□ 1.82
RTL1A6NKG5 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RTL1A6NKG5 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC26.43■■□□□ 1.82
RTL1A6NKG5 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC26.43■■□□□ 1.82
RTL1A6NKG5 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
RTL1A6NKG5 TERF1P1-201ENST00000311003 1181 ntBASIC26.43■■□□□ 1.82
RTL1A6NKG5 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
RTL1A6NKG5 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RTL1A6NKG5 TUBB8P6-201ENST00000436895 1288 ntBASIC26.43■■□□□ 1.82
RTL1A6NKG5 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
RTL1A6NKG5 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
RTL1A6NKG5 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC26.43■■□□□ 1.82
RTL1A6NKG5 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC26.43■■□□□ 1.82
RTL1A6NKG5 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
RTL1A6NKG5 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC26.42■■□□□ 1.82
RTL1A6NKG5 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
RTL1A6NKG5 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC26.42■■□□□ 1.82
RTL1A6NKG5 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC26.42■■□□□ 1.82
RTL1A6NKG5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
RTL1A6NKG5 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC26.42■■□□□ 1.82
RTL1A6NKG5 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
RTL1A6NKG5 AC005521.1-201ENST00000393351 872 ntBASIC26.42■■□□□ 1.82
RTL1A6NKG5 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
RTL1A6NKG5 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC26.42■■□□□ 1.82
RTL1A6NKG5 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC26.42■■□□□ 1.82
RTL1A6NKG5 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC26.42■■□□□ 1.82
RTL1A6NKG5 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
RTL1A6NKG5 SLC25A3P1-201ENST00000443844 931 ntBASIC26.42■■□□□ 1.82
RTL1A6NKG5 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
RTL1A6NKG5 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC26.42■■□□□ 1.82
RTL1A6NKG5 AL445228.2-201ENST00000605589 952 ntBASIC26.42■■□□□ 1.82
RTL1A6NKG5 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
RTL1A6NKG5 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RTL1A6NKG5 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RTL1A6NKG5 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
RTL1A6NKG5 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RTL1A6NKG5 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
RTL1A6NKG5 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC26.41■■□□□ 1.82
RTL1A6NKG5 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RTL1A6NKG5 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC26.41■■□□□ 1.82
RTL1A6NKG5 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
RTL1A6NKG5 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC26.41■■□□□ 1.82
RTL1A6NKG5 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RTL1A6NKG5 KRT18P22-201ENST00000402024 1347 ntBASIC26.4■■□□□ 1.82
RTL1A6NKG5 AC073508.3-201ENST00000619697 1419 ntBASIC26.4■■□□□ 1.82
RTL1A6NKG5 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RTL1A6NKG5 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC26.4■■□□□ 1.82
RTL1A6NKG5 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
RTL1A6NKG5 RBM42-202ENST00000586618 771 ntTSL 3 BASIC26.4■■□□□ 1.82
RTL1A6NKG5 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
RTL1A6NKG5 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
RTL1A6NKG5 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RTL1A6NKG5 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms