Protein–RNA interactions for Protein: A0A0U1RRI6

CENPVL3, Centromere protein V-like 3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPVL3A0A0U1RRI6 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CENPVL3A0A0U1RRI6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.09■□□□□ 0.17
CENPVL3A0A0U1RRI6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.09■□□□□ 0.17
CENPVL3A0A0U1RRI6 AF186192.3-201ENST00000583427 947 ntBASIC16.09■□□□□ 0.17
CENPVL3A0A0U1RRI6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.09■□□□□ 0.17
CENPVL3A0A0U1RRI6 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CENPVL3A0A0U1RRI6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CENPVL3A0A0U1RRI6 KRT17P2-201ENST00000300992 1314 ntBASIC16.09■□□□□ 0.17
CENPVL3A0A0U1RRI6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CENPVL3A0A0U1RRI6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CENPVL3A0A0U1RRI6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CENPVL3A0A0U1RRI6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CENPVL3A0A0U1RRI6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.09■□□□□ 0.17
CENPVL3A0A0U1RRI6 AC018553.1-201ENST00000616682 1458 ntBASIC16.09■□□□□ 0.17
CENPVL3A0A0U1RRI6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CENPVL3A0A0U1RRI6 AP006587.1-201ENST00000534129 1502 ntBASIC16.09■□□□□ 0.17
CENPVL3A0A0U1RRI6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CENPVL3A0A0U1RRI6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CENPVL3A0A0U1RRI6 TFP1-202ENST00000475455 1573 ntBASIC16.09■□□□□ 0.17
CENPVL3A0A0U1RRI6 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CENPVL3A0A0U1RRI6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CENPVL3A0A0U1RRI6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CENPVL3A0A0U1RRI6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
CENPVL3A0A0U1RRI6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CENPVL3A0A0U1RRI6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CENPVL3A0A0U1RRI6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CENPVL3A0A0U1RRI6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.08■□□□□ 0.17
CENPVL3A0A0U1RRI6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
CENPVL3A0A0U1RRI6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.08■□□□□ 0.16
CENPVL3A0A0U1RRI6 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.08■□□□□ 0.16
CENPVL3A0A0U1RRI6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CENPVL3A0A0U1RRI6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.08■□□□□ 0.16
CENPVL3A0A0U1RRI6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.08■□□□□ 0.16
CENPVL3A0A0U1RRI6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CENPVL3A0A0U1RRI6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
CENPVL3A0A0U1RRI6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.08■□□□□ 0.16
CENPVL3A0A0U1RRI6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.08■□□□□ 0.16
CENPVL3A0A0U1RRI6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CENPVL3A0A0U1RRI6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CENPVL3A0A0U1RRI6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CENPVL3A0A0U1RRI6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.08■□□□□ 0.16
CENPVL3A0A0U1RRI6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CENPVL3A0A0U1RRI6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.08■□□□□ 0.16
CENPVL3A0A0U1RRI6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
CENPVL3A0A0U1RRI6 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.08■□□□□ 0.16
CENPVL3A0A0U1RRI6 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CENPVL3A0A0U1RRI6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.08■□□□□ 0.16
CENPVL3A0A0U1RRI6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CENPVL3A0A0U1RRI6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.08■□□□□ 0.16
CENPVL3A0A0U1RRI6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CENPVL3A0A0U1RRI6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.07■□□□□ 0.16
CENPVL3A0A0U1RRI6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
CENPVL3A0A0U1RRI6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.07■□□□□ 0.16
CENPVL3A0A0U1RRI6 AC073314.1-201ENST00000568729 2216 ntBASIC16.07■□□□□ 0.16
CENPVL3A0A0U1RRI6 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CENPVL3A0A0U1RRI6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CENPVL3A0A0U1RRI6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CENPVL3A0A0U1RRI6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.07■□□□□ 0.16
CENPVL3A0A0U1RRI6 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CENPVL3A0A0U1RRI6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.07■□□□□ 0.16
CENPVL3A0A0U1RRI6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.07■□□□□ 0.16
CENPVL3A0A0U1RRI6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.07■□□□□ 0.16
CENPVL3A0A0U1RRI6 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.07■□□□□ 0.16
CENPVL3A0A0U1RRI6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.07■□□□□ 0.16
CENPVL3A0A0U1RRI6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.07■□□□□ 0.16
CENPVL3A0A0U1RRI6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.07■□□□□ 0.16
CENPVL3A0A0U1RRI6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.07■□□□□ 0.16
CENPVL3A0A0U1RRI6 MIR4785-201ENST00000585005 73 ntBASIC16.07■□□□□ 0.16
CENPVL3A0A0U1RRI6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.07■□□□□ 0.16
CENPVL3A0A0U1RRI6 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.07■□□□□ 0.16
CENPVL3A0A0U1RRI6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CENPVL3A0A0U1RRI6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CENPVL3A0A0U1RRI6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CENPVL3A0A0U1RRI6 PHGDH-210ENST00000641115 1638 ntBASIC16.07■□□□□ 0.16
CENPVL3A0A0U1RRI6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.07■□□□□ 0.16
CENPVL3A0A0U1RRI6 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CENPVL3A0A0U1RRI6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.07■□□□□ 0.16
CENPVL3A0A0U1RRI6 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.07■□□□□ 0.16
CENPVL3A0A0U1RRI6 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
CENPVL3A0A0U1RRI6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CENPVL3A0A0U1RRI6 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CENPVL3A0A0U1RRI6 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CENPVL3A0A0U1RRI6 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.06■□□□□ 0.16
CENPVL3A0A0U1RRI6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.06■□□□□ 0.16
CENPVL3A0A0U1RRI6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CENPVL3A0A0U1RRI6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CENPVL3A0A0U1RRI6 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CENPVL3A0A0U1RRI6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CENPVL3A0A0U1RRI6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CENPVL3A0A0U1RRI6 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CENPVL3A0A0U1RRI6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CENPVL3A0A0U1RRI6 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CENPVL3A0A0U1RRI6 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CENPVL3A0A0U1RRI6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CENPVL3A0A0U1RRI6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.06■□□□□ 0.16
CENPVL3A0A0U1RRI6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CENPVL3A0A0U1RRI6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CENPVL3A0A0U1RRI6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CENPVL3A0A0U1RRI6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.06■□□□□ 0.16
CENPVL3A0A0U1RRI6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 1723.9 ms