Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 PTBP1P-201ENST00000554374 1601 ntBASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV10A0A0B4J240 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV10A0A0B4J240 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAV10A0A0B4J240 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV10A0A0B4J240 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC14.02□□□□□ -0.16
TRAV10A0A0B4J240 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAV10A0A0B4J240 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TRAV10A0A0B4J240 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV10A0A0B4J240 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAV10A0A0B4J240 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV10A0A0B4J240 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC14.02□□□□□ -0.16
TRAV10A0A0B4J240 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV10A0A0B4J240 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV10A0A0B4J240 HTR7P1-201ENST00000538670 1336 ntBASIC14.02□□□□□ -0.17
TRAV10A0A0B4J240 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV10A0A0B4J240 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV10A0A0B4J240 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV10A0A0B4J240 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV10A0A0B4J240 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC14.02□□□□□ -0.17
TRAV10A0A0B4J240 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV10A0A0B4J240 TSPY7P-201ENST00000431358 1114 ntBASIC14.02□□□□□ -0.17
TRAV10A0A0B4J240 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV10A0A0B4J240 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
TRAV10A0A0B4J240 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC14.02□□□□□ -0.17
TRAV10A0A0B4J240 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV10A0A0B4J240 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC14.02□□□□□ -0.17
TRAV10A0A0B4J240 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV10A0A0B4J240 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TRAV10A0A0B4J240 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV10A0A0B4J240 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV10A0A0B4J240 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV10A0A0B4J240 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV10A0A0B4J240 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 DPP3P2-201ENST00000416030 1696 ntBASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 AC092720.2-201ENST00000602388 1665 ntBASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 AL137060.1-201ENST00000618151 2648 ntBASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 AC113410.3-201ENST00000623366 203 ntBASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 AF106564.1-201ENST00000607058 2553 ntBASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
TRAV10A0A0B4J240 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV10A0A0B4J240 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TRAV10A0A0B4J240 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV10A0A0B4J240 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV10A0A0B4J240 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV10A0A0B4J240 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV10A0A0B4J240 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV10A0A0B4J240 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRAV10A0A0B4J240 AC007225.1-201ENST00000566331 1836 ntBASIC14□□□□□ -0.17
TRAV10A0A0B4J240 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV10A0A0B4J240 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC14□□□□□ -0.17
TRAV10A0A0B4J240 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV10A0A0B4J240 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV10A0A0B4J240 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV10A0A0B4J240 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV10A0A0B4J240 AP002982.1-201ENST00000492365 877 ntBASIC14□□□□□ -0.17
TRAV10A0A0B4J240 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14□□□□□ -0.17
TRAV10A0A0B4J240 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14□□□□□ -0.17
TRAV10A0A0B4J240 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV10A0A0B4J240 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC14□□□□□ -0.17
TRAV10A0A0B4J240 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TRAV10A0A0B4J240 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms