Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DRB4X5D2U9 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DRB4X5D2U9 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DRB4X5D2U9 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5□□□□□ -1.61
HLA-DRB4X5D2U9 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DRB4X5D2U9 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DRB4X5D2U9 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 IMMTP1-201ENST00000435590 2219 ntBASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 RNU6-316P-201ENST00000391027 107 ntBASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 UBBP1-201ENST00000392399 473 ntBASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 AL136100.1-201ENST00000407696 330 ntBASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 RNA5SP231-201ENST00000410496 138 ntBASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 RN7SKP91-201ENST00000410852 288 ntBASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 ETF1P1-206ENST00000427296 984 ntBASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 RPL3P11-201ENST00000434028 1146 ntBASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 GAPDHP20-201ENST00000444107 1007 ntBASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 PFN1P11-201ENST00000445829 389 ntBASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 AC009963.4-201ENST00000448535 339 ntBASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 AL133480.2-201ENST00000456723 487 ntBASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 EIF3LP2-201ENST00000457262 807 ntBASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 RPL7AP23-201ENST00000482625 776 ntBASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 AC091849.1-201ENST00000509920 121 ntBASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 LDHC-204ENST00000536880 957 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 AC106785.4-201ENST00000569492 412 ntBASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 AC090774.2-201ENST00000584708 322 ntBASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 AL078624.2-201ENST00000605063 554 ntBASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 AP000577.1-201ENST00000624366 878 ntBASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 HSPD1P8-201ENST00000400121 1658 ntBASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DRB4X5D2U9 RACGAP1P-201ENST00000550663 1879 ntBASIC4.98□□□□□ -1.61
HLA-DRB4X5D2U9 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-DRB4X5D2U9 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC4.98□□□□□ -1.61
HLA-DRB4X5D2U9 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC4.98□□□□□ -1.61
HLA-DRB4X5D2U9 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DRB4X5D2U9 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HLA-DRB4X5D2U9 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DRB4X5D2U9 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DRB4X5D2U9 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DRB4X5D2U9 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC4.98□□□□□ -1.61
HLA-DRB4X5D2U9 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DRB4X5D2U9 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms