Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AL096816.1-201ENST00000623300 2920 ntBASIC6.9□□□□□ -1.3
NUP43Q8NFH3 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 HNRNPCP2-201ENST00000399515 881 ntBASIC6.9□□□□□ -1.3
NUP43Q8NFH3 AC231533.2-201ENST00000419045 978 ntBASIC6.9□□□□□ -1.3
NUP43Q8NFH3 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 FUNDC2P2-202ENST00000443452 493 ntBASIC6.9□□□□□ -1.3
NUP43Q8NFH3 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 NPM1P49-201ENST00000448027 714 ntBASIC6.9□□□□□ -1.3
NUP43Q8NFH3 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 RPS12P31-201ENST00000491419 398 ntBASIC6.9□□□□□ -1.3
NUP43Q8NFH3 TPT1P3-201ENST00000492841 512 ntBASIC6.9□□□□□ -1.3
NUP43Q8NFH3 AC034244.1-201ENST00000507687 207 ntBASIC6.9□□□□□ -1.3
NUP43Q8NFH3 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 GAPDHP71-201ENST00000511530 1003 ntBASIC6.9□□□□□ -1.3
NUP43Q8NFH3 RNU6-1129P-201ENST00000515964 104 ntBASIC6.9□□□□□ -1.3
NUP43Q8NFH3 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 OR5F2P-201ENST00000532761 941 ntBASIC6.9□□□□□ -1.3
NUP43Q8NFH3 AC244502.1-205ENST00000535351 571 ntTSL 4 BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 AC025918.2-201ENST00000558683 763 ntBASIC6.9□□□□□ -1.3
NUP43Q8NFH3 OR4F28P-201ENST00000559128 938 ntBASIC6.9□□□□□ -1.3
NUP43Q8NFH3 AC104229.1-201ENST00000561364 255 ntBASIC6.9□□□□□ -1.3
NUP43Q8NFH3 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 OR4F8P-201ENST00000589943 937 ntBASIC6.9□□□□□ -1.3
NUP43Q8NFH3 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 OR5AH1P-201ENST00000595968 283 ntBASIC6.9□□□□□ -1.3
NUP43Q8NFH3 AL390058.1-201ENST00000603834 629 ntBASIC6.9□□□□□ -1.3
NUP43Q8NFH3 AC245297.2-201ENST00000610119 565 ntBASIC6.9□□□□□ -1.3
NUP43Q8NFH3 VIS1.1-201ENST00000610517 203 ntBASIC6.9□□□□□ -1.3
NUP43Q8NFH3 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 AC243830.2-201ENST00000618067 630 ntBASIC6.9□□□□□ -1.3
NUP43Q8NFH3 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
NUP43Q8NFH3 AP000526.1-201ENST00000603308 1388 ntBASIC6.9□□□□□ -1.31
NUP43Q8NFH3 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
NUP43Q8NFH3 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NUP43Q8NFH3 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NUP43Q8NFH3 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NUP43Q8NFH3 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NUP43Q8NFH3 WASF5P-205ENST00000428639 1455 ntBASIC6.9□□□□□ -1.31
NUP43Q8NFH3 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
NUP43Q8NFH3 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NUP43Q8NFH3 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NUP43Q8NFH3 FGG-204ENST00000405164 1539 ntTSL 5 BASIC6.9□□□□□ -1.31
NUP43Q8NFH3 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NUP43Q8NFH3 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NUP43Q8NFH3 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC6.9□□□□□ -1.31
NUP43Q8NFH3 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NUP43Q8NFH3 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NUP43Q8NFH3 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NUP43Q8NFH3 AP003119.3-201ENST00000566747 4192 ntBASIC6.9□□□□□ -1.31
NUP43Q8NFH3 AC138207.6-201ENST00000579164 1967 ntBASIC6.89□□□□□ -1.31
NUP43Q8NFH3 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC6.89□□□□□ -1.31
NUP43Q8NFH3 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NUP43Q8NFH3 AC018765.1-201ENST00000623357 3446 ntBASIC6.89□□□□□ -1.31
NUP43Q8NFH3 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NUP43Q8NFH3 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NUP43Q8NFH3 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NUP43Q8NFH3 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NUP43Q8NFH3 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NUP43Q8NFH3 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC6.89□□□□□ -1.31
NUP43Q8NFH3 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
NUP43Q8NFH3 ARHGAP42P4-201ENST00000549782 2934 ntBASIC6.89□□□□□ -1.31
NUP43Q8NFH3 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
NUP43Q8NFH3 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC6.89□□□□□ -1.31
NUP43Q8NFH3 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
NUP43Q8NFH3 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NUP43Q8NFH3 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
NUP43Q8NFH3 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NUP43Q8NFH3 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NUP43Q8NFH3 U3.1-201ENST00000362500 215 ntBASIC6.89□□□□□ -1.31
NUP43Q8NFH3 RN7SKP211-201ENST00000363328 315 ntBASIC6.89□□□□□ -1.31
NUP43Q8NFH3 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC6.89□□□□□ -1.31
NUP43Q8NFH3 SNORA3.1-201ENST00000408166 111 ntBASIC6.89□□□□□ -1.31
NUP43Q8NFH3 RNU4-72P-201ENST00000410754 173 ntBASIC6.89□□□□□ -1.31
NUP43Q8NFH3 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC6.89□□□□□ -1.31
NUP43Q8NFH3 AC245060.4-201ENST00000413293 1121 ntBASIC6.89□□□□□ -1.31
NUP43Q8NFH3 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC6.89□□□□□ -1.31
NUP43Q8NFH3 TAS2R2P-201ENST00000421146 910 ntBASIC6.89□□□□□ -1.31
NUP43Q8NFH3 VDAC1P2-201ENST00000423609 850 ntBASIC6.89□□□□□ -1.31
NUP43Q8NFH3 EMC3-AS1-204ENST00000430621 683 ntTSL 2 BASIC6.89□□□□□ -1.31
NUP43Q8NFH3 MTCO1P43-201ENST00000431831 488 ntBASIC6.89□□□□□ -1.31
NUP43Q8NFH3 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC6.89□□□□□ -1.31
NUP43Q8NFH3 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC6.89□□□□□ -1.31
NUP43Q8NFH3 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC6.89□□□□□ -1.31
NUP43Q8NFH3 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC6.89□□□□□ -1.31
NUP43Q8NFH3 AL008629.1-201ENST00000438615 184 ntBASIC6.89□□□□□ -1.31
NUP43Q8NFH3 AL445567.1-201ENST00000439121 144 ntBASIC6.89□□□□□ -1.31
NUP43Q8NFH3 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC6.89□□□□□ -1.31
NUP43Q8NFH3 HSFY3P-201ENST00000444242 1191 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms