Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 OR7E1P-201ENST00000533891 958 ntBASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 LINC02325-203ENST00000554862 733 ntTSL 4 BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 AC007494.1-201ENST00000562293 760 ntBASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 AL049840.5-201ENST00000602827 552 ntBASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 AC092032.1-201ENST00000603090 165 ntBASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 AC005070.2-201ENST00000604391 260 ntBASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 AC139792.1-201ENST00000607051 647 ntBASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 AC005277.2-201ENST00000617898 390 ntBASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 AC012100.3-201ENST00000624738 575 ntBASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 AMD1-201ENST00000368876 3040 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 SNORA55-201ENST00000364587 135 ntBASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 OR2W4P-201ENST00000406496 926 ntBASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 RNA5SP280-201ENST00000411230 115 ntBASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 AC093107.1-201ENST00000422772 609 ntBASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 RN7SL654P-201ENST00000479178 292 ntBASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 RN7SL849P-201ENST00000485236 295 ntBASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 RN7SL647P-201ENST00000485429 300 ntBASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 AC114728.1-201ENST00000488289 483 ntBASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 GOLGA5P1-201ENST00000507317 980 ntBASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 RN7SKP11-201ENST00000517018 287 ntBASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 AC023794.4-201ENST00000551732 754 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 AL162632.2-201ENST00000553933 399 ntBASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 FAM30C-201ENST00000561158 410 ntBASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 AC091304.4-201ENST00000565703 620 ntBASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 AC114546.4-201ENST00000624413 369 ntBASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 AL137058.3-201ENST00000624531 3099 ntBASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 OR5AU1-204ENST00000641822 1197 ntBASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 AL137141.1-201ENST00000624622 4836 ntBASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 IMMTP1-201ENST00000435590 2219 ntBASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
CCDC71LQ8N9Z2 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
CCDC71LQ8N9Z2 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms