Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 CU633906.2-201ENST00000624576 2257 ntTSL 5 BASIC8.78□□□□□ -1
SCUBE3Q8IX30 AL391666.1-201ENST00000442570 2764 ntBASIC8.78□□□□□ -1
SCUBE3Q8IX30 MTMR3-205ENST00000406629 3758 ntTSL 5 BASIC8.77□□□□□ -1
SCUBE3Q8IX30 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC8.77□□□□□ -1
SCUBE3Q8IX30 DGKG-202ENST00000344484 3445 ntTSL 1 (best) BASIC8.77□□□□□ -1
SCUBE3Q8IX30 COLGALT2-202ENST00000367520 2325 ntTSL 2 BASIC8.77□□□□□ -1
SCUBE3Q8IX30 INPP5B-205ENST00000373027 3905 ntTSL 2 BASIC8.77□□□□□ -1
SCUBE3Q8IX30 NUMA1-232ENST00000613205 3940 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1
SCUBE3Q8IX30 ZHX3-214ENST00000559234 6296 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
SCUBE3Q8IX30 C2CD5-218ENST00000545552 3471 ntTSL 2 BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 NOS1-202ENST00000338101 4462 ntTSL 5 BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 BX284613.1-201ENST00000452221 1641 ntBASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 AMBRA1-206ENST00000528950 4102 ntTSL 5 BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 KLHL8-202ENST00000425278 4049 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 MMP3-201ENST00000299855 2016 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 AL079343.1-201ENST00000572358 1771 ntBASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 MBP-206ENST00000397863 4800 ntTSL 3 BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 AL031595.3-201ENST00000624919 14262 ntBASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 AL080312.1-201ENST00000256654 824 ntBASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 Y_RNA.18-201ENST00000362461 102 ntBASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 TMEM244-201ENST00000368143 545 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 NOX1-203ENST00000372964 661 ntTSL 2 BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 MTIF3-202ENST00000381120 1005 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 C14orf2-202ENST00000414262 842 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 Z74696.1-201ENST00000428208 1123 ntBASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 AC243962.1-201ENST00000441512 579 ntBASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 LINC02022-201ENST00000448129 635 ntTSL 2 BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 AC013787.1-201ENST00000460165 307 ntBASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 RN7SL135P-201ENST00000490144 278 ntBASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 AC027338.2-201ENST00000504382 526 ntBASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 HMGB1P44-201ENST00000508597 572 ntBASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 AC022695.2-201ENST00000518042 768 ntTSL 3 BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 AC091987.1-202ENST00000522464 789 ntTSL 3 BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 PGAM1P8-201ENST00000526979 453 ntBASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 BCAP31P2-201ENST00000563143 399 ntBASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 BCAP31P1-201ENST00000565437 385 ntBASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 LINC01255-203ENST00000587189 591 ntTSL 4 BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 AC073534.1-201ENST00000598671 1056 ntBASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 CASC15-205ENST00000606336 1288 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 AL365204.3-201ENST00000612448 685 ntBASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 FDFT1-212ENST00000528643 1909 ntTSL 2 BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 BCL9P1-201ENST00000506012 2561 ntBASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 AC092111.2-201ENST00000611627 1414 ntBASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 THNSL1-202ENST00000524413 3788 ntAPPRIS P1 TSL 3 BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 SAG-201ENST00000409110 1591 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 TRAF6P1-201ENST00000429404 1558 ntBASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 AL008638.2-201ENST00000453934 2383 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 EEF1A1P12-201ENST00000443590 1346 ntBASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 SP140L-201ENST00000243810 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 OGDH-210ENST00000631326 4116 ntTSL 5 BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 HTR2A-201ENST00000378688 4835 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SCUBE3Q8IX30 ADCY10P1-203ENST00000567255 4569 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
SCUBE3Q8IX30 XIRP2-206ENST00000409728 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
SCUBE3Q8IX30 CCRL2-204ENST00000400882 1642 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
SCUBE3Q8IX30 MAGI1-IT1-201ENST00000460754 2567 ntTSL 2 BASIC8.76□□□□□ -1.01
SCUBE3Q8IX30 L3MBTL4-203ENST00000400105 3546 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
SCUBE3Q8IX30 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SCUBE3Q8IX30 KCNJ15-221ENST00000613499 3049 ntAPPRIS P1 TSL 4 BASIC8.76□□□□□ -1.01
SCUBE3Q8IX30 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
SCUBE3Q8IX30 GUCY1A3-202ENST00000393832 4286 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
SCUBE3Q8IX30 SOCS6-203ENST00000582322 2625 ntAPPRIS P1 TSL 3 BASIC8.76□□□□□ -1.01
SCUBE3Q8IX30 ODF2-209ENST00000434106 3890 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
SCUBE3Q8IX30 QRSL1P1-201ENST00000400977 1540 ntBASIC8.76□□□□□ -1.01
SCUBE3Q8IX30 TTTY25P-201ENST00000558356 1505 ntBASIC8.76□□□□□ -1.01
SCUBE3Q8IX30 AL160191.3-201ENST00000619152 2203 ntBASIC8.76□□□□□ -1.01
SCUBE3Q8IX30 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC8.76□□□□□ -1.01
SCUBE3Q8IX30 PHF6-204ENST00000370803 4489 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
SCUBE3Q8IX30 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
SCUBE3Q8IX30 EPB41L1-201ENST00000202028 3514 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
SCUBE3Q8IX30 MYL6-201ENST00000293422 664 ntAPPRIS ALT1 TSL 2 BASIC8.76□□□□□ -1.01
SCUBE3Q8IX30 Y_RNA.529-201ENST00000384586 119 ntBASIC8.76□□□□□ -1.01
SCUBE3Q8IX30 Y_RNA.573-201ENST00000384763 105 ntBASIC8.76□□□□□ -1.01
SCUBE3Q8IX30 GHRHR-204ENST00000409316 1292 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
SCUBE3Q8IX30 PUDPP1-201ENST00000421058 495 ntBASIC8.76□□□□□ -1.01
SCUBE3Q8IX30 AC073367.1-201ENST00000421480 697 ntTSL 2 BASIC8.76□□□□□ -1.01
SCUBE3Q8IX30 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC8.76□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms