Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 AC005790.1-201ENST00000619774 450 ntBASIC6.94□□□□□ -1.3
ATG4DQ86TL0 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 AC099667.1-201ENST00000624222 469 ntBASIC6.94□□□□□ -1.3
ATG4DQ86TL0 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 EEF1A1P15-201ENST00000395772 1408 ntBASIC6.93□□□□□ -1.3
ATG4DQ86TL0 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 AL353795.1-201ENST00000439134 1775 ntBASIC6.93□□□□□ -1.3
ATG4DQ86TL0 LARGE-AS1-203ENST00000438159 2618 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 AC016722.2-201ENST00000429761 1835 ntTSL 2 BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 SNORD46-201ENST00000364043 104 ntBASIC6.93□□□□□ -1.3
ATG4DQ86TL0 AL450313.1-201ENST00000366376 452 ntTSL 3 BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 Y_RNA.408-201ENST00000383987 102 ntBASIC6.93□□□□□ -1.3
ATG4DQ86TL0 SNORD116-12-201ENST00000384468 92 ntBASIC6.93□□□□□ -1.3
ATG4DQ86TL0 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 AL139806.1-201ENST00000403057 1002 ntBASIC6.93□□□□□ -1.3
ATG4DQ86TL0 AL109918.1-202ENST00000406724 436 ntBASIC6.93□□□□□ -1.3
ATG4DQ86TL0 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 AC003071.2-201ENST00000423857 315 ntBASIC6.93□□□□□ -1.3
ATG4DQ86TL0 AL593851.1-201ENST00000426171 157 ntBASIC6.93□□□□□ -1.3
ATG4DQ86TL0 MTND1P14-201ENST00000427400 950 ntBASIC6.93□□□□□ -1.3
ATG4DQ86TL0 AC022816.1-201ENST00000436469 804 ntTSL 5 BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 PHBP4-201ENST00000437447 837 ntBASIC6.93□□□□□ -1.3
ATG4DQ86TL0 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 AC114755.5-201ENST00000447760 831 ntBASIC6.93□□□□□ -1.3
ATG4DQ86TL0 TPT1P14-201ENST00000448018 505 ntBASIC6.93□□□□□ -1.3
ATG4DQ86TL0 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 AC097262.1-201ENST00000452559 548 ntBASIC6.93□□□□□ -1.3
ATG4DQ86TL0 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 RN7SL19P-201ENST00000462522 306 ntBASIC6.93□□□□□ -1.3
ATG4DQ86TL0 TDGF1P6-201ENST00000463873 448 ntBASIC6.93□□□□□ -1.3
ATG4DQ86TL0 AC109454.1-201ENST00000471205 498 ntBASIC6.93□□□□□ -1.3
ATG4DQ86TL0 RN7SL861P-201ENST00000473793 285 ntBASIC6.93□□□□□ -1.3
ATG4DQ86TL0 RN7SL563P-201ENST00000481233 298 ntBASIC6.93□□□□□ -1.3
ATG4DQ86TL0 OR9N1P-201ENST00000491296 333 ntBASIC6.93□□□□□ -1.3
ATG4DQ86TL0 AC114300.1-201ENST00000502347 280 ntBASIC6.93□□□□□ -1.3
ATG4DQ86TL0 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 AC017007.5-201ENST00000511590 874 ntTSL 2 BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 PTK2-220ENST00000520151 573 ntTSL 4 BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 OR4A43P-201ENST00000532938 908 ntBASIC6.93□□□□□ -1.3
ATG4DQ86TL0 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 ULK4P2-202ENST00000564187 492 ntBASIC6.93□□□□□ -1.3
ATG4DQ86TL0 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 VN1R83P-201ENST00000595685 445 ntBASIC6.93□□□□□ -1.3
ATG4DQ86TL0 AC092653.1-201ENST00000608509 531 ntBASIC6.93□□□□□ -1.3
ATG4DQ86TL0 IGKV1OR1-1-201ENST00000613775 347 ntBASIC6.93□□□□□ -1.3
ATG4DQ86TL0 RBM12B-AS1-201ENST00000623283 653 ntBASIC6.93□□□□□ -1.3
ATG4DQ86TL0 GMFB-210ENST00000628554 639 ntTSL 4 BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 AC119674.1-201ENST00000641611 1210 ntBASIC6.93□□□□□ -1.3
ATG4DQ86TL0 Z99129.4-201ENST00000624649 2435 ntBASIC6.93□□□□□ -1.3
ATG4DQ86TL0 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 ATP5A1P10-201ENST00000622403 1603 ntBASIC6.93□□□□□ -1.3
ATG4DQ86TL0 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 AP000766.1-201ENST00000561746 4140 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms