Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
PTCH1Q13635 AC096537.2-201ENST00000413707 714 ntBASIC8.97□□□□□ -0.97
PTCH1Q13635 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC8.97□□□□□ -0.97
PTCH1Q13635 AC026348.1-201ENST00000462549 1053 ntBASIC8.97□□□□□ -0.97
PTCH1Q13635 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC8.97□□□□□ -0.97
PTCH1Q13635 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC8.97□□□□□ -0.97
PTCH1Q13635 OR5H7P-201ENST00000514084 930 ntBASIC8.97□□□□□ -0.97
PTCH1Q13635 Y_RNA.667-201ENST00000516212 107 ntBASIC8.97□□□□□ -0.97
PTCH1Q13635 SCARNA18.1-201ENST00000516330 83 ntBASIC8.97□□□□□ -0.97
PTCH1Q13635 RN7SKP238-201ENST00000516483 249 ntBASIC8.97□□□□□ -0.97
PTCH1Q13635 RNA5SP271-201ENST00000516700 88 ntBASIC8.97□□□□□ -0.97
PTCH1Q13635 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC8.97□□□□□ -0.97
PTCH1Q13635 AC027544.3-201ENST00000535082 757 ntBASIC8.97□□□□□ -0.97
PTCH1Q13635 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC8.97□□□□□ -0.97
PTCH1Q13635 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
PTCH1Q13635 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC8.97□□□□□ -0.97
PTCH1Q13635 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC8.97□□□□□ -0.97
PTCH1Q13635 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC8.97□□□□□ -0.97
PTCH1Q13635 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC8.97□□□□□ -0.97
PTCH1Q13635 AP001823.1-201ENST00000604056 1003 ntBASIC8.97□□□□□ -0.97
PTCH1Q13635 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC8.97□□□□□ -0.97
PTCH1Q13635 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC8.97□□□□□ -0.97
PTCH1Q13635 TSHZ2-205ENST00000626626 670 ntBASIC8.97□□□□□ -0.97
PTCH1Q13635 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC8.97□□□□□ -0.97
PTCH1Q13635 AC011455.2-201ENST00000599320 3336 ntBASIC8.97□□□□□ -0.97
PTCH1Q13635 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
PTCH1Q13635 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
PTCH1Q13635 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
PTCH1Q13635 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC8.96□□□□□ -0.97
PTCH1Q13635 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC8.96□□□□□ -0.97
PTCH1Q13635 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
PTCH1Q13635 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
PTCH1Q13635 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
PTCH1Q13635 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
PTCH1Q13635 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC8.96□□□□□ -0.98
PTCH1Q13635 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC8.96□□□□□ -0.98
PTCH1Q13635 SPATA31C2-201ENST00000324915 3777 ntBASIC8.96□□□□□ -0.98
PTCH1Q13635 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
PTCH1Q13635 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
PTCH1Q13635 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC8.96□□□□□ -0.98
PTCH1Q13635 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
PTCH1Q13635 RNA5SP242-201ENST00000364171 118 ntBASIC8.96□□□□□ -0.98
PTCH1Q13635 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC8.96□□□□□ -0.98
PTCH1Q13635 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC8.96□□□□□ -0.98
PTCH1Q13635 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC8.96□□□□□ -0.98
PTCH1Q13635 DNAJC19P5-201ENST00000443295 316 ntBASIC8.96□□□□□ -0.98
PTCH1Q13635 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC8.96□□□□□ -0.98
PTCH1Q13635 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC8.96□□□□□ -0.98
PTCH1Q13635 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC8.96□□□□□ -0.98
PTCH1Q13635 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC8.96□□□□□ -0.98
PTCH1Q13635 AC007225.2-201ENST00000562529 256 ntBASIC8.96□□□□□ -0.98
PTCH1Q13635 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC8.96□□□□□ -0.98
PTCH1Q13635 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC8.96□□□□□ -0.98
PTCH1Q13635 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC8.96□□□□□ -0.98
PTCH1Q13635 AL591167.1-201ENST00000607321 456 ntBASIC8.96□□□□□ -0.98
PTCH1Q13635 MIR6719-201ENST00000622428 87 ntBASIC8.96□□□□□ -0.98
PTCH1Q13635 AC183089.2-201ENST00000637931 916 ntBASIC8.96□□□□□ -0.98
PTCH1Q13635 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
PTCH1Q13635 CYP2G2P-201ENST00000594920 1485 ntBASIC8.96□□□□□ -0.98
PTCH1Q13635 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC8.96□□□□□ -0.98
PTCH1Q13635 AC015871.3-201ENST00000618835 2261 ntBASIC8.96□□□□□ -0.98
PTCH1Q13635 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC8.96□□□□□ -0.98
PTCH1Q13635 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
PTCH1Q13635 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PTCH1Q13635 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PTCH1Q13635 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
PTCH1Q13635 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC8.95□□□□□ -0.98
PTCH1Q13635 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PTCH1Q13635 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
PTCH1Q13635 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC8.95□□□□□ -0.98
PTCH1Q13635 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
PTCH1Q13635 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
PTCH1Q13635 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC8.95□□□□□ -0.98
PTCH1Q13635 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PTCH1Q13635 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC8.95□□□□□ -0.98
PTCH1Q13635 AL133243.2-201ENST00000610331 1621 ntBASIC8.95□□□□□ -0.98
PTCH1Q13635 MITF-203ENST00000328528 4680 ntTSL 5 BASIC8.95□□□□□ -0.98
PTCH1Q13635 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PTCH1Q13635 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PTCH1Q13635 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PTCH1Q13635 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
PTCH1Q13635 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PTCH1Q13635 AL157884.1-201ENST00000424561 454 ntBASIC8.95□□□□□ -0.98
PTCH1Q13635 KRTAP8-2P-201ENST00000440620 186 ntBASIC8.95□□□□□ -0.98
PTCH1Q13635 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC8.95□□□□□ -0.98
PTCH1Q13635 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC8.95□□□□□ -0.98
PTCH1Q13635 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC8.95□□□□□ -0.98
PTCH1Q13635 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC8.95□□□□□ -0.98
PTCH1Q13635 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC8.95□□□□□ -0.98
PTCH1Q13635 OR1N1-202ENST00000619659 939 ntBASIC8.95□□□□□ -0.98
PTCH1Q13635 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
PTCH1Q13635 COL6A4P1-202ENST00000487147 4317 ntBASIC8.94□□□□□ -0.98
PTCH1Q13635 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
PTCH1Q13635 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC8.94□□□□□ -0.98
PTCH1Q13635 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
PTCH1Q13635 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
PTCH1Q13635 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
PTCH1Q13635 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
PTCH1Q13635 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
PTCH1Q13635 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 193.9 ms