Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC4.5□□□□□ -1.69
RPL39P62891 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC4.5□□□□□ -1.69
RPL39P62891 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
RPL39P62891 AL021368.3-201ENST00000607119 578 ntBASIC4.5□□□□□ -1.69
RPL39P62891 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC4.5□□□□□ -1.69
RPL39P62891 AC010320.5-201ENST00000619124 676 ntBASIC4.5□□□□□ -1.69
RPL39P62891 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RPL39P62891 FKBP1AP4-201ENST00000631775 336 ntBASIC4.5□□□□□ -1.69
RPL39P62891 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC4.5□□□□□ -1.69
RPL39P62891 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
RPL39P62891 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RPL39P62891 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
RPL39P62891 MTA3-204ENST00000406911 2041 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
RPL39P62891 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RPL39P62891 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC4.49□□□□□ -1.69
RPL39P62891 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
RPL39P62891 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
RPL39P62891 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RPL39P62891 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RPL39P62891 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
RPL39P62891 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RPL39P62891 AC125238.2-201ENST00000430003 1440 ntBASIC4.49□□□□□ -1.69
RPL39P62891 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RPL39P62891 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RPL39P62891 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RPL39P62891 MIR128-2-201ENST00000384893 84 ntBASIC4.49□□□□□ -1.69
RPL39P62891 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RPL39P62891 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RPL39P62891 PDCL3P5-201ENST00000398028 722 ntBASIC4.49□□□□□ -1.69
RPL39P62891 AL035467.1-201ENST00000403583 686 ntBASIC4.49□□□□□ -1.69
RPL39P62891 AL121835.1-201ENST00000404250 354 ntBASIC4.49□□□□□ -1.69
RPL39P62891 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
RPL39P62891 RN7SKP268-201ENST00000411107 316 ntBASIC4.49□□□□□ -1.69
RPL39P62891 SNX18P13-201ENST00000412442 529 ntBASIC4.49□□□□□ -1.69
RPL39P62891 RPL23AP85-201ENST00000421838 433 ntBASIC4.49□□□□□ -1.69
RPL39P62891 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RPL39P62891 AC092066.1-201ENST00000425131 317 ntBASIC4.49□□□□□ -1.69
RPL39P62891 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
RPL39P62891 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RPL39P62891 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC4.49□□□□□ -1.69
RPL39P62891 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC4.49□□□□□ -1.69
RPL39P62891 PRKAR1AP1-201ENST00000441422 1162 ntBASIC4.49□□□□□ -1.69
RPL39P62891 SNRPBP1-201ENST00000443634 282 ntBASIC4.49□□□□□ -1.69
RPL39P62891 RPL7AP71-201ENST00000451120 739 ntBASIC4.49□□□□□ -1.69
RPL39P62891 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC4.49□□□□□ -1.69
RPL39P62891 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC4.49□□□□□ -1.69
RPL39P62891 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
RPL39P62891 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC4.49□□□□□ -1.69
RPL39P62891 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC4.49□□□□□ -1.69
RPL39P62891 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC4.49□□□□□ -1.69
RPL39P62891 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RPL39P62891 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC4.49□□□□□ -1.69
RPL39P62891 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC4.49□□□□□ -1.69
RPL39P62891 IGKV2D-38-201ENST00000518423 240 ntBASIC4.49□□□□□ -1.69
RPL39P62891 IGKV1D-22-201ENST00000518953 324 ntBASIC4.49□□□□□ -1.69
RPL39P62891 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC4.49□□□□□ -1.69
RPL39P62891 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC4.49□□□□□ -1.69
RPL39P62891 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC4.49□□□□□ -1.69
RPL39P62891 AC021820.1-201ENST00000525564 808 ntBASIC4.49□□□□□ -1.69
RPL39P62891 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC4.49□□□□□ -1.69
RPL39P62891 SCARNA9-201ENST00000530422 353 ntBASIC4.49□□□□□ -1.69
RPL39P62891 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC4.49□□□□□ -1.69
RPL39P62891 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC4.49□□□□□ -1.69
RPL39P62891 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RPL39P62891 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC4.49□□□□□ -1.69
RPL39P62891 BMS1P8-201ENST00000565049 1178 ntBASIC4.49□□□□□ -1.69
RPL39P62891 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC4.49□□□□□ -1.69
RPL39P62891 AC090651.1-201ENST00000567865 634 ntBASIC4.49□□□□□ -1.69
RPL39P62891 ANP32BP1-202ENST00000568553 737 ntBASIC4.49□□□□□ -1.69
RPL39P62891 MIR1273F-201ENST00000580581 99 ntBASIC4.49□□□□□ -1.69
RPL39P62891 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC4.49□□□□□ -1.69
RPL39P62891 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC4.49□□□□□ -1.69
RPL39P62891 AL352984.2-201ENST00000611153 546 ntBASIC4.49□□□□□ -1.69
RPL39P62891 PTCHD3P1-201ENST00000612350 537 ntBASIC4.49□□□□□ -1.69
RPL39P62891 AL161931.1-201ENST00000612768 246 ntBASIC4.49□□□□□ -1.69
RPL39P62891 FRG2MP-201ENST00000613317 856 ntBASIC4.49□□□□□ -1.69
RPL39P62891 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RPL39P62891 AC007671.1-201ENST00000616957 830 ntBASIC4.49□□□□□ -1.69
RPL39P62891 pRNA.9-201ENST00000618609 89 ntBASIC4.49□□□□□ -1.69
RPL39P62891 AC073488.9-201ENST00000631601 754 ntBASIC4.49□□□□□ -1.69
RPL39P62891 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RPL39P62891 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC4.49□□□□□ -1.69
RPL39P62891 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RPL39P62891 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC4.49□□□□□ -1.69
RPL39P62891 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RPL39P62891 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RPL39P62891 TRIM53CP-201ENST00000531490 1354 ntBASIC4.49□□□□□ -1.69
RPL39P62891 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC4.49□□□□□ -1.69
RPL39P62891 SAGE3P-201ENST00000619800 1635 ntBASIC4.49□□□□□ -1.69
RPL39P62891 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
RPL39P62891 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
RPL39P62891 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RPL39P62891 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RPL39P62891 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
RPL39P62891 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RPL39P62891 MAPK10-287ENST00000641217 3037 ntBASIC4.48□□□□□ -1.69
RPL39P62891 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RPL39P62891 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RPL39P62891 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RPL39P62891 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms