Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 RPS18P1-201ENST00000447840 458 ntBASIC6.66□□□□□ -1.34
LIMK2P53671 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.66□□□□□ -1.34
LIMK2P53671 RPS3AP49-201ENST00000472161 790 ntBASIC6.66□□□□□ -1.34
LIMK2P53671 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.66□□□□□ -1.34
LIMK2P53671 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.66□□□□□ -1.34
LIMK2P53671 AC026774.2-201ENST00000513990 1098 ntBASIC6.66□□□□□ -1.34
LIMK2P53671 AC138517.1-201ENST00000515724 568 ntBASIC6.66□□□□□ -1.34
LIMK2P53671 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC6.66□□□□□ -1.34
LIMK2P53671 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC6.66□□□□□ -1.34
LIMK2P53671 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.66□□□□□ -1.34
LIMK2P53671 MIR3157-201ENST00000578688 85 ntBASIC6.66□□□□□ -1.34
LIMK2P53671 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.66□□□□□ -1.34
LIMK2P53671 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.66□□□□□ -1.34
LIMK2P53671 AC011497.2-201ENST00000600255 639 ntBASIC6.66□□□□□ -1.34
LIMK2P53671 DIMT1P1-201ENST00000603970 763 ntBASIC6.66□□□□□ -1.34
LIMK2P53671 AL157899.1-201ENST00000604110 936 ntBASIC6.66□□□□□ -1.34
LIMK2P53671 AC091193.1-201ENST00000604640 448 ntBASIC6.66□□□□□ -1.34
LIMK2P53671 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LIMK2P53671 AC079414.3-201ENST00000612986 1090 ntBASIC6.66□□□□□ -1.34
LIMK2P53671 AC004241.2-201ENST00000614562 444 ntBASIC6.66□□□□□ -1.34
LIMK2P53671 MIR6503-201ENST00000622884 86 ntBASIC6.66□□□□□ -1.34
LIMK2P53671 AC012254.5-201ENST00000623573 478 ntBASIC6.66□□□□□ -1.34
LIMK2P53671 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.66□□□□□ -1.34
LIMK2P53671 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
LIMK2P53671 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LIMK2P53671 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
LIMK2P53671 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
LIMK2P53671 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LIMK2P53671 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LIMK2P53671 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LIMK2P53671 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
LIMK2P53671 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
LIMK2P53671 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
LIMK2P53671 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
LIMK2P53671 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
LIMK2P53671 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
LIMK2P53671 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.66□□□□□ -1.34
LIMK2P53671 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
LIMK2P53671 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
LIMK2P53671 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
LIMK2P53671 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.65□□□□□ -1.34
LIMK2P53671 AC087392.3-202ENST00000358446 1754 ntBASIC6.65□□□□□ -1.34
LIMK2P53671 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
LIMK2P53671 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.34
LIMK2P53671 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.65□□□□□ -1.34
LIMK2P53671 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.65□□□□□ -1.34
LIMK2P53671 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
LIMK2P53671 AC010894.1-201ENST00000313760 361 ntBASIC6.65□□□□□ -1.34
LIMK2P53671 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
LIMK2P53671 RNU1-46P-201ENST00000384425 164 ntBASIC6.65□□□□□ -1.34
LIMK2P53671 AC019178.1-201ENST00000392337 440 ntBASIC6.65□□□□□ -1.34
LIMK2P53671 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.65□□□□□ -1.34
LIMK2P53671 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.65□□□□□ -1.34
LIMK2P53671 RPS7P12-201ENST00000422385 582 ntBASIC6.65□□□□□ -1.34
LIMK2P53671 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.65□□□□□ -1.34
LIMK2P53671 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.65□□□□□ -1.34
LIMK2P53671 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.65□□□□□ -1.34
LIMK2P53671 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.65□□□□□ -1.34
LIMK2P53671 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.65□□□□□ -1.34
LIMK2P53671 AL121578.2-201ENST00000448797 447 ntBASIC6.65□□□□□ -1.34
LIMK2P53671 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.65□□□□□ -1.34
LIMK2P53671 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.65□□□□□ -1.34
LIMK2P53671 AC010442.1-201ENST00000515583 816 ntBASIC6.65□□□□□ -1.34
LIMK2P53671 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.65□□□□□ -1.34
LIMK2P53671 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC6.65□□□□□ -1.34
LIMK2P53671 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.65□□□□□ -1.34
LIMK2P53671 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.65□□□□□ -1.34
LIMK2P53671 AC019257.2-201ENST00000605539 497 ntBASIC6.65□□□□□ -1.34
LIMK2P53671 AL390877.1-201ENST00000605704 214 ntBASIC6.65□□□□□ -1.34
LIMK2P53671 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.65□□□□□ -1.34
LIMK2P53671 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.65□□□□□ -1.34
LIMK2P53671 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.65□□□□□ -1.34
LIMK2P53671 AL596275.2-207ENST00000641188 675 ntBASIC6.65□□□□□ -1.34
LIMK2P53671 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
LIMK2P53671 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.65□□□□□ -1.34
LIMK2P53671 AC022613.3-201ENST00000560740 1346 ntBASIC6.65□□□□□ -1.35
LIMK2P53671 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.65□□□□□ -1.35
LIMK2P53671 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.65□□□□□ -1.35
LIMK2P53671 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
LIMK2P53671 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.65□□□□□ -1.35
LIMK2P53671 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
LIMK2P53671 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
LIMK2P53671 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
LIMK2P53671 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.65□□□□□ -1.35
LIMK2P53671 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.65□□□□□ -1.35
LIMK2P53671 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
LIMK2P53671 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
LIMK2P53671 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.65□□□□□ -1.35
LIMK2P53671 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
LIMK2P53671 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.65□□□□□ -1.35
LIMK2P53671 AC062022.1-201ENST00000451026 1684 ntBASIC6.65□□□□□ -1.35
LIMK2P53671 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.64□□□□□ -1.35
LIMK2P53671 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
LIMK2P53671 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.64□□□□□ -1.35
LIMK2P53671 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
LIMK2P53671 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
LIMK2P53671 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
LIMK2P53671 RN7SKP38-201ENST00000410782 309 ntBASIC6.64□□□□□ -1.35
LIMK2P53671 RN7SKP296-201ENST00000411185 341 ntBASIC6.64□□□□□ -1.35
LIMK2P53671 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms