Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SMARCA4P51532 RPS3AP2-201ENST00000407190 754 ntBASIC11.25□□□□□ -0.61
SMARCA4P51532 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC11.25□□□□□ -0.61
SMARCA4P51532 SDHDP6-201ENST00000414693 480 ntBASIC11.25□□□□□ -0.61
SMARCA4P51532 AC007394.1-201ENST00000421941 531 ntBASIC11.25□□□□□ -0.61
SMARCA4P51532 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC11.25□□□□□ -0.61
SMARCA4P51532 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SMARCA4P51532 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC11.25□□□□□ -0.61
SMARCA4P51532 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC11.25□□□□□ -0.61
SMARCA4P51532 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC11.25□□□□□ -0.61
SMARCA4P51532 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMARCA4P51532 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
SMARCA4P51532 AC009948.5-201ENST00000624360 4406 ntBASIC11.25□□□□□ -0.61
SMARCA4P51532 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC11.25□□□□□ -0.61
SMARCA4P51532 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMARCA4P51532 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC11.25□□□□□ -0.61
SMARCA4P51532 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMARCA4P51532 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC11.25□□□□□ -0.61
SMARCA4P51532 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SMARCA4P51532 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
SMARCA4P51532 VPS8-207ENST00000436792 5011 ntAPPRIS ALT1 TSL 2 BASIC11.24□□□□□ -0.61
SMARCA4P51532 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SMARCA4P51532 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC11.24□□□□□ -0.61
SMARCA4P51532 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC11.24□□□□□ -0.61
SMARCA4P51532 AC091390.2-201ENST00000432573 374 ntBASIC11.24□□□□□ -0.61
SMARCA4P51532 AC245047.1-201ENST00000433276 873 ntBASIC11.24□□□□□ -0.61
SMARCA4P51532 AL445466.1-201ENST00000448432 357 ntBASIC11.24□□□□□ -0.61
SMARCA4P51532 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC11.24□□□□□ -0.61
SMARCA4P51532 RANP2-201ENST00000456833 229 ntBASIC11.24□□□□□ -0.61
SMARCA4P51532 AP006245.2-201ENST00000522004 300 ntBASIC11.24□□□□□ -0.61
SMARCA4P51532 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC11.24□□□□□ -0.61
SMARCA4P51532 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC11.24□□□□□ -0.61
SMARCA4P51532 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMARCA4P51532 AC138915.4-201ENST00000565549 4147 ntBASIC11.24□□□□□ -0.61
SMARCA4P51532 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMARCA4P51532 KCNA2-205ENST00000633222 11877 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
SMARCA4P51532 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC11.24□□□□□ -0.61
SMARCA4P51532 AC131392.2-201ENST00000505635 4332 ntBASIC11.24□□□□□ -0.61
SMARCA4P51532 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC11.24□□□□□ -0.61
SMARCA4P51532 AC062022.1-201ENST00000451026 1684 ntBASIC11.24□□□□□ -0.61
SMARCA4P51532 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMARCA4P51532 ACP6-205ENST00000583509 6923 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMARCA4P51532 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC11.24□□□□□ -0.61
SMARCA4P51532 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMARCA4P51532 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
SMARCA4P51532 OR7E101P-201ENST00000400428 513 ntBASIC11.24□□□□□ -0.61
SMARCA4P51532 RNU4ATAC2P-201ENST00000408674 126 ntBASIC11.24□□□□□ -0.61
SMARCA4P51532 RNA5SP156-201ENST00000410250 110 ntBASIC11.24□□□□□ -0.61
SMARCA4P51532 TUBB4BP6-201ENST00000437576 479 ntBASIC11.24□□□□□ -0.61
SMARCA4P51532 UBA52P7-201ENST00000486088 380 ntBASIC11.24□□□□□ -0.61
SMARCA4P51532 AC106800.2-201ENST00000514009 1103 ntBASIC11.24□□□□□ -0.61
SMARCA4P51532 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC11.24□□□□□ -0.61
SMARCA4P51532 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC11.24□□□□□ -0.61
SMARCA4P51532 FAT3-206ENST00000533797 7894 ntTSL 2 BASIC11.23□□□□□ -0.61
SMARCA4P51532 MARK2P4-201ENST00000503381 2380 ntBASIC11.23□□□□□ -0.61
SMARCA4P51532 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SMARCA4P51532 AC011416.1-201ENST00000514947 1732 ntBASIC11.23□□□□□ -0.61
SMARCA4P51532 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
SMARCA4P51532 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SMARCA4P51532 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SMARCA4P51532 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC11.23□□□□□ -0.61
SMARCA4P51532 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC11.23□□□□□ -0.61
SMARCA4P51532 SHTN1-207ENST00000615301 6730 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
SMARCA4P51532 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
SMARCA4P51532 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
SMARCA4P51532 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC11.23□□□□□ -0.61
SMARCA4P51532 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC11.23□□□□□ -0.61
SMARCA4P51532 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SMARCA4P51532 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SMARCA4P51532 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC11.23□□□□□ -0.61
SMARCA4P51532 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
SMARCA4P51532 RN7SKP161-201ENST00000411110 305 ntBASIC11.23□□□□□ -0.61
SMARCA4P51532 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC11.23□□□□□ -0.61
SMARCA4P51532 AL713922.1-201ENST00000416477 747 ntBASIC11.23□□□□□ -0.61
SMARCA4P51532 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC11.23□□□□□ -0.61
SMARCA4P51532 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC11.23□□□□□ -0.61
SMARCA4P51532 AC026348.1-201ENST00000462549 1053 ntBASIC11.23□□□□□ -0.61
SMARCA4P51532 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC11.23□□□□□ -0.61
SMARCA4P51532 AC092865.4-201ENST00000477936 615 ntBASIC11.23□□□□□ -0.61
SMARCA4P51532 AC106800.3-201ENST00000511389 308 ntBASIC11.23□□□□□ -0.61
SMARCA4P51532 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC11.23□□□□□ -0.61
SMARCA4P51532 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC11.23□□□□□ -0.61
SMARCA4P51532 AC009120.3-201ENST00000563335 499 ntBASIC11.23□□□□□ -0.61
SMARCA4P51532 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC11.23□□□□□ -0.61
SMARCA4P51532 AP000864.1-201ENST00000609424 650 ntBASIC11.23□□□□□ -0.61
SMARCA4P51532 SDR42E1P1-201ENST00000611327 477 ntBASIC11.23□□□□□ -0.61
SMARCA4P51532 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC11.23□□□□□ -0.61
SMARCA4P51532 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SMARCA4P51532 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
SMARCA4P51532 COL25A1-208ENST00000610288 4799 ntTSL 5 BASIC11.23□□□□□ -0.61
SMARCA4P51532 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMARCA4P51532 Z93929.1-201ENST00000418200 1475 ntBASIC11.22□□□□□ -0.61
SMARCA4P51532 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
SMARCA4P51532 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMARCA4P51532 AC053481.2-202ENST00000582394 1500 ntBASIC11.22□□□□□ -0.61
SMARCA4P51532 EDA-213ENST00000616899 4643 ntTSL 5 BASIC11.22□□□□□ -0.61
SMARCA4P51532 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMARCA4P51532 ZSWIM5P3-201ENST00000511265 2743 ntBASIC11.22□□□□□ -0.61
SMARCA4P51532 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
SMARCA4P51532 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms