Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SOX2P48431 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SOX2P48431 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SOX2P48431 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SOX2P48431 FAUP2-201ENST00000394301 401 ntBASIC5.95□□□□□ -1.46
SOX2P48431 AL050305.1-201ENST00000399993 1230 ntBASIC5.95□□□□□ -1.46
SOX2P48431 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SOX2P48431 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
SOX2P48431 RSL24D1P1-201ENST00000404972 493 ntBASIC5.95□□□□□ -1.46
SOX2P48431 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.95□□□□□ -1.46
SOX2P48431 AC096537.2-201ENST00000413707 714 ntBASIC5.95□□□□□ -1.46
SOX2P48431 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SOX2P48431 VDAC1P10-201ENST00000416715 891 ntBASIC5.95□□□□□ -1.46
SOX2P48431 AC019205.1-201ENST00000421830 730 ntBASIC5.95□□□□□ -1.46
SOX2P48431 CHCHD3P1-201ENST00000425516 676 ntBASIC5.95□□□□□ -1.46
SOX2P48431 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SOX2P48431 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.95□□□□□ -1.46
SOX2P48431 CRYGGP-201ENST00000443337 145 ntBASIC5.95□□□□□ -1.46
SOX2P48431 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.95□□□□□ -1.46
SOX2P48431 RPL7P14-201ENST00000449851 741 ntBASIC5.95□□□□□ -1.46
SOX2P48431 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC5.95□□□□□ -1.46
SOX2P48431 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC5.95□□□□□ -1.46
SOX2P48431 SULT1D1P-201ENST00000458020 882 ntBASIC5.95□□□□□ -1.46
SOX2P48431 RN7SL308P-201ENST00000464971 297 ntBASIC5.95□□□□□ -1.46
SOX2P48431 AC091982.1-202ENST00000473923 343 ntBASIC5.95□□□□□ -1.46
SOX2P48431 RN7SL379P-201ENST00000479912 293 ntBASIC5.95□□□□□ -1.46
SOX2P48431 AC117395.1-201ENST00000487390 403 ntBASIC5.95□□□□□ -1.46
SOX2P48431 H3F3AP3-201ENST00000497682 407 ntBASIC5.95□□□□□ -1.46
SOX2P48431 AC093763.2-201ENST00000505334 1223 ntBASIC5.95□□□□□ -1.46
SOX2P48431 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC5.95□□□□□ -1.46
SOX2P48431 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SOX2P48431 OXR1-212ENST00000521592 993 ntTSL 5 BASIC5.95□□□□□ -1.46
SOX2P48431 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.95□□□□□ -1.46
SOX2P48431 AC138701.1-201ENST00000524329 714 ntBASIC5.95□□□□□ -1.46
SOX2P48431 C11orf70-202ENST00000526781 845 ntTSL 3 BASIC5.95□□□□□ -1.46
SOX2P48431 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
SOX2P48431 AL049869.4-201ENST00000555669 178 ntBASIC5.95□□□□□ -1.46
SOX2P48431 AC090971.3-201ENST00000557871 1041 ntBASIC5.95□□□□□ -1.46
SOX2P48431 AC027176.2-201ENST00000559166 746 ntBASIC5.95□□□□□ -1.46
SOX2P48431 AC093510.2-201ENST00000562820 896 ntBASIC5.95□□□□□ -1.46
SOX2P48431 AL513548.1-201ENST00000562904 1724 ntBASIC5.95□□□□□ -1.46
SOX2P48431 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SOX2P48431 AC104072.1-201ENST00000568817 668 ntBASIC5.95□□□□□ -1.46
SOX2P48431 AC018521.4-201ENST00000578239 531 ntTSL 4 BASIC5.95□□□□□ -1.46
SOX2P48431 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.95□□□□□ -1.46
SOX2P48431 RN7SL199P-201ENST00000578752 281 ntBASIC5.95□□□□□ -1.46
SOX2P48431 RN7SL656P-201ENST00000579044 281 ntBASIC5.95□□□□□ -1.46
SOX2P48431 CTSLP2-201ENST00000580501 394 ntBASIC5.95□□□□□ -1.46
SOX2P48431 RN7SL404P-201ENST00000582421 281 ntBASIC5.95□□□□□ -1.46
SOX2P48431 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.95□□□□□ -1.46
SOX2P48431 RN7SL664P-201ENST00000584239 305 ntBASIC5.95□□□□□ -1.46
SOX2P48431 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
SOX2P48431 AC005495.1-201ENST00000586611 1211 ntBASIC5.95□□□□□ -1.46
SOX2P48431 AC006116.7-201ENST00000590141 756 ntBASIC5.95□□□□□ -1.46
SOX2P48431 AL136139.1-201ENST00000605568 222 ntBASIC5.95□□□□□ -1.46
SOX2P48431 AL008582.1-201ENST00000609612 442 ntBASIC5.95□□□□□ -1.46
SOX2P48431 GAPDHP41-201ENST00000613707 975 ntBASIC5.95□□□□□ -1.46
SOX2P48431 Six3os1_4.1-201ENST00000615706 324 ntBASIC5.95□□□□□ -1.46
SOX2P48431 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.95□□□□□ -1.46
SOX2P48431 RN7SL126P-201ENST00000616400 299 ntBASIC5.95□□□□□ -1.46
SOX2P48431 AL445493.3-201ENST00000619568 477 ntBASIC5.95□□□□□ -1.46
SOX2P48431 AC068234.2-201ENST00000619646 522 ntBASIC5.95□□□□□ -1.46
SOX2P48431 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC5.95□□□□□ -1.46
SOX2P48431 AC127071.2-201ENST00000623293 527 ntBASIC5.95□□□□□ -1.46
SOX2P48431 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.95□□□□□ -1.46
SOX2P48431 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC5.95□□□□□ -1.46
SOX2P48431 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SOX2P48431 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
SOX2P48431 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SOX2P48431 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SOX2P48431 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.95□□□□□ -1.46
SOX2P48431 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SOX2P48431 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SOX2P48431 PSMC1P4-201ENST00000515236 1327 ntBASIC5.95□□□□□ -1.46
SOX2P48431 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.95□□□□□ -1.46
SOX2P48431 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
SOX2P48431 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SOX2P48431 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SOX2P48431 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC5.95□□□□□ -1.46
SOX2P48431 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SOX2P48431 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
SOX2P48431 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SOX2P48431 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SOX2P48431 AC096992.2-201ENST00000609553 1684 ntBASIC5.94□□□□□ -1.46
SOX2P48431 AC007485.2-201ENST00000623493 1667 ntBASIC5.94□□□□□ -1.46
SOX2P48431 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SOX2P48431 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC5.94□□□□□ -1.46
SOX2P48431 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.94□□□□□ -1.46
SOX2P48431 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC5.94□□□□□ -1.46
SOX2P48431 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC5.94□□□□□ -1.46
SOX2P48431 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SOX2P48431 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.94□□□□□ -1.46
SOX2P48431 AMD1-201ENST00000368876 3040 ntTSL 5 BASIC5.94□□□□□ -1.46
SOX2P48431 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
SOX2P48431 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
SOX2P48431 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SOX2P48431 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.94□□□□□ -1.46
SOX2P48431 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.94□□□□□ -1.46
SOX2P48431 DDX6P1-205ENST00000441966 1436 ntBASIC5.94□□□□□ -1.46
SOX2P48431 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 146.6 ms