Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CNGA1P29973 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
CNGA1P29973 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CNGA1P29973 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC7.9□□□□□ -1.14
CNGA1P29973 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.9□□□□□ -1.14
CNGA1P29973 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.9□□□□□ -1.14
CNGA1P29973 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC7.9□□□□□ -1.14
CNGA1P29973 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC7.9□□□□□ -1.14
CNGA1P29973 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CNGA1P29973 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC7.9□□□□□ -1.14
CNGA1P29973 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CNGA1P29973 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CNGA1P29973 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
CNGA1P29973 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CNGA1P29973 RNA5SP85-201ENST00000365378 119 ntBASIC7.9□□□□□ -1.14
CNGA1P29973 RNA5SP122-201ENST00000384457 108 ntBASIC7.9□□□□□ -1.14
CNGA1P29973 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CNGA1P29973 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CNGA1P29973 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC7.9□□□□□ -1.14
CNGA1P29973 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CNGA1P29973 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7.9□□□□□ -1.14
CNGA1P29973 RN7SKP86-201ENST00000410454 332 ntBASIC7.9□□□□□ -1.14
CNGA1P29973 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC7.9□□□□□ -1.14
CNGA1P29973 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC7.9□□□□□ -1.14
CNGA1P29973 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC7.9□□□□□ -1.14
CNGA1P29973 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC7.9□□□□□ -1.14
CNGA1P29973 MTND5P8-201ENST00000449817 1083 ntBASIC7.9□□□□□ -1.14
CNGA1P29973 AL353718.1-201ENST00000451028 517 ntBASIC7.9□□□□□ -1.14
CNGA1P29973 OR13C1P-201ENST00000457612 963 ntBASIC7.9□□□□□ -1.14
CNGA1P29973 OR9N1P-201ENST00000491296 333 ntBASIC7.9□□□□□ -1.14
CNGA1P29973 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC7.9□□□□□ -1.14
CNGA1P29973 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.9□□□□□ -1.14
CNGA1P29973 PFN1P8-201ENST00000497012 543 ntBASIC7.9□□□□□ -1.14
CNGA1P29973 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.14
CNGA1P29973 AC120036.3-201ENST00000517826 292 ntBASIC7.9□□□□□ -1.14
CNGA1P29973 PTTG3P-201ENST00000521862 606 ntBASIC7.9□□□□□ -1.14
CNGA1P29973 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.9□□□□□ -1.14
CNGA1P29973 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7.9□□□□□ -1.14
CNGA1P29973 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.9□□□□□ -1.14
CNGA1P29973 AC096708.2-201ENST00000577676 512 ntBASIC7.9□□□□□ -1.14
CNGA1P29973 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC7.9□□□□□ -1.14
CNGA1P29973 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC7.9□□□□□ -1.14
CNGA1P29973 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC7.9□□□□□ -1.14
CNGA1P29973 AC023513.1-201ENST00000604396 691 ntBASIC7.9□□□□□ -1.14
CNGA1P29973 AL355333.1-201ENST00000605632 279 ntBASIC7.9□□□□□ -1.14
CNGA1P29973 AC073111.2-201ENST00000605657 1075 ntBASIC7.9□□□□□ -1.14
CNGA1P29973 AC104184.1-201ENST00000607513 721 ntBASIC7.9□□□□□ -1.14
CNGA1P29973 AC012676.3-201ENST00000614983 479 ntBASIC7.9□□□□□ -1.14
CNGA1P29973 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CNGA1P29973 AC253576.2-201ENST00000618815 580 ntBASIC7.9□□□□□ -1.14
CNGA1P29973 AC089999.3-201ENST00000622440 577 ntBASIC7.9□□□□□ -1.14
CNGA1P29973 FO681491.1-202ENST00000623392 737 ntBASIC7.9□□□□□ -1.14
CNGA1P29973 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC7.9□□□□□ -1.14
CNGA1P29973 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CNGA1P29973 DPY19L1P1-201ENST00000417811 2594 ntBASIC7.9□□□□□ -1.15
CNGA1P29973 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.9□□□□□ -1.15
CNGA1P29973 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.9□□□□□ -1.15
CNGA1P29973 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC7.9□□□□□ -1.15
CNGA1P29973 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.9□□□□□ -1.15
CNGA1P29973 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC7.9□□□□□ -1.15
CNGA1P29973 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
CNGA1P29973 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CNGA1P29973 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
CNGA1P29973 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.89□□□□□ -1.15
CNGA1P29973 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CNGA1P29973 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CNGA1P29973 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
CNGA1P29973 AC102941.1-201ENST00000567616 1537 ntBASIC7.89□□□□□ -1.15
CNGA1P29973 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CNGA1P29973 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CNGA1P29973 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC7.89□□□□□ -1.15
CNGA1P29973 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CNGA1P29973 AC061975.5-201ENST00000584928 1441 ntBASIC7.89□□□□□ -1.15
CNGA1P29973 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CNGA1P29973 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CNGA1P29973 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC7.89□□□□□ -1.15
CNGA1P29973 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CNGA1P29973 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CNGA1P29973 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CNGA1P29973 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CNGA1P29973 FDPSP5-201ENST00000399474 1057 ntBASIC7.89□□□□□ -1.15
CNGA1P29973 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC7.89□□□□□ -1.15
CNGA1P29973 VN1R53P-201ENST00000429536 957 ntBASIC7.89□□□□□ -1.15
CNGA1P29973 KCTD9P1-201ENST00000430462 1167 ntBASIC7.89□□□□□ -1.15
CNGA1P29973 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC7.89□□□□□ -1.15
CNGA1P29973 MRPS33P4-201ENST00000434892 317 ntBASIC7.89□□□□□ -1.15
CNGA1P29973 AC007383.1-201ENST00000445875 636 ntBASIC7.89□□□□□ -1.15
CNGA1P29973 LAPTM4BP1-201ENST00000447781 690 ntBASIC7.89□□□□□ -1.15
CNGA1P29973 AC002486.2-201ENST00000447806 590 ntBASIC7.89□□□□□ -1.15
CNGA1P29973 RN7SL88P-201ENST00000480166 299 ntBASIC7.89□□□□□ -1.15
CNGA1P29973 RPS27P20-201ENST00000492051 246 ntBASIC7.89□□□□□ -1.15
CNGA1P29973 RPL12P7-201ENST00000493832 494 ntBASIC7.89□□□□□ -1.15
CNGA1P29973 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC7.89□□□□□ -1.15
CNGA1P29973 AC146944.3-201ENST00000509969 371 ntBASIC7.89□□□□□ -1.15
CNGA1P29973 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC7.89□□□□□ -1.15
CNGA1P29973 AC027801.3-201ENST00000515049 698 ntBASIC7.89□□□□□ -1.15
CNGA1P29973 AC112206.4-201ENST00000515142 405 ntBASIC7.89□□□□□ -1.15
CNGA1P29973 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC7.89□□□□□ -1.15
CNGA1P29973 RN7SKP196-201ENST00000516267 345 ntBASIC7.89□□□□□ -1.15
CNGA1P29973 AC005363.1-201ENST00000530779 351 ntBASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms