Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 RAB5CP1-201ENST00000395972 580 ntBASIC5.84□□□□□ -1.48
KIAA1549Q9HCM3 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.84□□□□□ -1.48
KIAA1549Q9HCM3 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
KIAA1549Q9HCM3 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.84□□□□□ -1.48
KIAA1549Q9HCM3 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.84□□□□□ -1.48
KIAA1549Q9HCM3 AC083862.1-201ENST00000427378 1242 ntBASIC5.84□□□□□ -1.48
KIAA1549Q9HCM3 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.84□□□□□ -1.48
KIAA1549Q9HCM3 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.84□□□□□ -1.48
KIAA1549Q9HCM3 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.84□□□□□ -1.48
KIAA1549Q9HCM3 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.84□□□□□ -1.48
KIAA1549Q9HCM3 RN7SL649P-201ENST00000496974 275 ntBASIC5.84□□□□□ -1.48
KIAA1549Q9HCM3 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.84□□□□□ -1.48
KIAA1549Q9HCM3 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.84□□□□□ -1.48
KIAA1549Q9HCM3 TOMM20P1-201ENST00000534518 427 ntBASIC5.84□□□□□ -1.48
KIAA1549Q9HCM3 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC5.84□□□□□ -1.48
KIAA1549Q9HCM3 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.84□□□□□ -1.48
KIAA1549Q9HCM3 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
KIAA1549Q9HCM3 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.84□□□□□ -1.48
KIAA1549Q9HCM3 AC114477.1-201ENST00000605097 605 ntBASIC5.84□□□□□ -1.48
KIAA1549Q9HCM3 AL589743.6-201ENST00000611025 117 ntBASIC5.84□□□□□ -1.48
KIAA1549Q9HCM3 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.84□□□□□ -1.48
KIAA1549Q9HCM3 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.84□□□□□ -1.48
KIAA1549Q9HCM3 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC5.84□□□□□ -1.48
KIAA1549Q9HCM3 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 RPL31-202ENST00000409000 641 ntTSL 2 BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 AC002127.1-201ENST00000421305 225 ntBASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 AC112492.2-201ENST00000432774 1030 ntBASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 RPL5P14-201ENST00000494197 878 ntBASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 AC124891.1-201ENST00000536322 519 ntBASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 AC004232.2-201ENST00000574245 821 ntBASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 NEK2P4-201ENST00000425793 1329 ntBASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 AL512310.3-201ENST00000547023 1335 ntBASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
KIAA1549Q9HCM3 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 STAG3L4-201ENST00000352103 530 ntBASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 AL663061.1-201ENST00000416625 580 ntBASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 RPSAP40-201ENST00000442343 891 ntBASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 HMGN1P2-201ENST00000445197 310 ntBASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 RPL23AP68-201ENST00000480924 445 ntBASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 RPSAP75-201ENST00000605848 301 ntBASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.82□□□□□ -1.48
KIAA1549Q9HCM3 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms