Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
PTF1AQ7RTS3 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 AC093278.2-201ENST00000564956 2485 ntBASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 RNA5SP346-201ENST00000363541 121 ntBASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 RPS7P14-201ENST00000426405 583 ntBASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 HNRNPA1P18-201ENST00000433537 927 ntBASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 AC064862.4-201ENST00000442180 334 ntBASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 RPS27AP2-201ENST00000457576 465 ntBASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 RPS4XP23-201ENST00000487801 237 ntBASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 MIR4700-201ENST00000578311 74 ntBASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 AC087575.1-201ENST00000585087 229 ntBASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 AC073488.2-201ENST00000631903 751 ntBASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 XRCC6P5-201ENST00000435236 1795 ntBASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 AC015689.2-201ENST00000528172 1738 ntBASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 AC104964.2-201ENST00000562242 4641 ntBASIC8.34□□□□□ -1.07
PTF1AQ7RTS3 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC8.34□□□□□ -1.08
PTF1AQ7RTS3 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
PTF1AQ7RTS3 OR7E25P-202ENST00000641088 5937 ntBASIC8.33□□□□□ -1.08
PTF1AQ7RTS3 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC8.33□□□□□ -1.08
PTF1AQ7RTS3 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PTF1AQ7RTS3 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC8.33□□□□□ -1.08
PTF1AQ7RTS3 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC8.33□□□□□ -1.08
PTF1AQ7RTS3 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PTF1AQ7RTS3 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PTF1AQ7RTS3 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC8.33□□□□□ -1.08
PTF1AQ7RTS3 DPPA2P3-201ENST00000411853 655 ntBASIC8.33□□□□□ -1.08
PTF1AQ7RTS3 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PTF1AQ7RTS3 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC8.33□□□□□ -1.08
PTF1AQ7RTS3 SOCS5P1-201ENST00000440415 949 ntBASIC8.33□□□□□ -1.08
PTF1AQ7RTS3 AC016908.1-201ENST00000442571 1219 ntBASIC8.33□□□□□ -1.08
PTF1AQ7RTS3 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC8.33□□□□□ -1.08
PTF1AQ7RTS3 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC8.33□□□□□ -1.08
PTF1AQ7RTS3 RN7SL369P-201ENST00000477138 299 ntBASIC8.33□□□□□ -1.08
PTF1AQ7RTS3 RPS14P8-201ENST00000478778 369 ntBASIC8.33□□□□□ -1.08
PTF1AQ7RTS3 RN7SL193P-201ENST00000491708 276 ntBASIC8.33□□□□□ -1.08
PTF1AQ7RTS3 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC8.33□□□□□ -1.08
PTF1AQ7RTS3 AC007225.2-201ENST00000562529 256 ntBASIC8.33□□□□□ -1.08
PTF1AQ7RTS3 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PTF1AQ7RTS3 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC8.33□□□□□ -1.08
PTF1AQ7RTS3 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC8.33□□□□□ -1.08
PTF1AQ7RTS3 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PTF1AQ7RTS3 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PTF1AQ7RTS3 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC8.33□□□□□ -1.08
PTF1AQ7RTS3 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC8.33□□□□□ -1.08
PTF1AQ7RTS3 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PTF1AQ7RTS3 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PTF1AQ7RTS3 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC8.33□□□□□ -1.08
PTF1AQ7RTS3 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PTF1AQ7RTS3 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC8.32□□□□□ -1.08
PTF1AQ7RTS3 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
PTF1AQ7RTS3 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PTF1AQ7RTS3 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
PTF1AQ7RTS3 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PTF1AQ7RTS3 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PTF1AQ7RTS3 OR9K1P-201ENST00000326513 941 ntBASIC8.32□□□□□ -1.08
PTF1AQ7RTS3 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC8.32□□□□□ -1.08
PTF1AQ7RTS3 FIGN-202ENST00000409634 746 ntTSL 5 BASIC8.32□□□□□ -1.08
PTF1AQ7RTS3 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC8.32□□□□□ -1.08
PTF1AQ7RTS3 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
PTF1AQ7RTS3 PCBP2P1-201ENST00000437262 977 ntBASIC8.32□□□□□ -1.08
PTF1AQ7RTS3 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC8.32□□□□□ -1.08
PTF1AQ7RTS3 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC8.32□□□□□ -1.08
PTF1AQ7RTS3 AC027026.1-201ENST00000532323 742 ntBASIC8.32□□□□□ -1.08
PTF1AQ7RTS3 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC8.32□□□□□ -1.08
PTF1AQ7RTS3 AC090651.1-201ENST00000567865 634 ntBASIC8.32□□□□□ -1.08
PTF1AQ7RTS3 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PTF1AQ7RTS3 AC020916.2-201ENST00000591242 360 ntBASIC8.32□□□□□ -1.08
PTF1AQ7RTS3 AL136295.6-201ENST00000610486 658 ntBASIC8.32□□□□□ -1.08
PTF1AQ7RTS3 WDR75-207ENST00000631047 270 ntTSL 5 BASIC8.32□□□□□ -1.08
PTF1AQ7RTS3 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC8.32□□□□□ -1.08
PTF1AQ7RTS3 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PTF1AQ7RTS3 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC8.32□□□□□ -1.08
PTF1AQ7RTS3 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PTF1AQ7RTS3 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms