Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 THEM7P-201ENST00000419556 672 ntBASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 RPS7P12-201ENST00000422385 582 ntBASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 CDK7P1-201ENST00000434574 693 ntBASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 GAPDHP33-201ENST00000443168 1013 ntBASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 RPL5P12-201ENST00000477071 851 ntBASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 RN7SL741P-201ENST00000482473 289 ntBASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 RN7SL568P-201ENST00000493069 298 ntBASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 ABCA11P-202ENST00000504019 2110 ntBASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 MT1CP-201ENST00000567054 174 ntBASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 MIR6780B-201ENST00000610307 79 ntBASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 AC112243.1-201ENST00000623949 3851 ntBASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 AC015871.3-201ENST00000618835 2261 ntBASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 AL022323.4-201ENST00000623980 13120 ntBASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 SNORA64.3-201ENST00000365647 134 ntBASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 AL645939.3-201ENST00000435408 225 ntBASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 AC092106.2-201ENST00000436597 487 ntBASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 AC007383.1-201ENST00000445875 636 ntBASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 PGBD4P1-201ENST00000473644 407 ntBASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 RN7SL413P-201ENST00000482700 297 ntBASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 RN7SL649P-201ENST00000496974 275 ntBASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 FTH1P8-201ENST00000498161 514 ntBASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 AC093870.1-201ENST00000506837 213 ntBASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 RN7SKP183-201ENST00000517169 324 ntBASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 AC024405.1-201ENST00000532521 1042 ntBASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 TDGP1-201ENST00000543961 1229 ntBASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 AC106785.4-201ENST00000569492 412 ntBASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 AC025283.1-201ENST00000572039 734 ntBASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 AC019257.2-201ENST00000605539 497 ntBASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 AC004241.2-201ENST00000614562 444 ntBASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 AC010333.3-201ENST00000615100 402 ntBASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.17□□□□□ -1.42
H3F3CQ6NXT2 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
H3F3CQ6NXT2 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
H3F3CQ6NXT2 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
H3F3CQ6NXT2 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
H3F3CQ6NXT2 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms