Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.33□□□□□ -1.4
CLRN1P58418 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC6.33□□□□□ -1.4
CLRN1P58418 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CLRN1P58418 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CLRN1P58418 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CLRN1P58418 Z86062.1-201ENST00000406773 777 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 TYMSP1-201ENST00000407851 869 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 OR51B3P-201ENST00000412287 913 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.33□□□□□ -1.4
CLRN1P58418 SEPT7P8-201ENST00000413308 775 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 RANP4-201ENST00000413361 655 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.33□□□□□ -1.4
CLRN1P58418 AL773545.3-201ENST00000414297 706 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 AL592310.1-201ENST00000414330 671 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 AL158050.1-201ENST00000416077 457 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.33□□□□□ -1.4
CLRN1P58418 MTCO1P51-201ENST00000427672 1060 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 VDAC2P3-201ENST00000430995 828 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC6.33□□□□□ -1.4
CLRN1P58418 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.33□□□□□ -1.4
CLRN1P58418 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC6.33□□□□□ -1.4
CLRN1P58418 MTCYBP31-201ENST00000438855 1122 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC6.33□□□□□ -1.4
CLRN1P58418 AC009237.4-201ENST00000441078 238 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 AL591719.1-201ENST00000444669 744 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 SDHCP3-201ENST00000445371 506 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 EIF2S2P2-201ENST00000447161 982 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 AL451063.1-201ENST00000450164 1133 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 AL390728.3-201ENST00000452704 270 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 IGKV1OR22-5-201ENST00000458718 354 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 AC008620.1-201ENST00000468453 592 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 RN7SL145P-201ENST00000469955 296 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 AC079944.1-201ENST00000485426 495 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 RPS4XP23-201ENST00000487801 237 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 AC079594.1-201ENST00000489757 331 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CLRN1P58418 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CLRN1P58418 AC097460.2-201ENST00000511857 741 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 AC138866.1-201ENST00000514522 497 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 AC010476.1-201ENST00000519111 851 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 OR4A17P-201ENST00000526032 904 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC6.33□□□□□ -1.4
CLRN1P58418 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC6.33□□□□□ -1.4
CLRN1P58418 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CLRN1P58418 VDAC2P2-201ENST00000544463 901 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 AC126177.6-201ENST00000550420 1009 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CLRN1P58418 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC6.33□□□□□ -1.4
CLRN1P58418 AL132857.1-201ENST00000555180 708 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC6.33□□□□□ -1.4
CLRN1P58418 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC6.33□□□□□ -1.4
CLRN1P58418 MIR4258-201ENST00000580920 91 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 AL606834.3-201ENST00000602615 496 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
CLRN1P58418 AL450336.1-201ENST00000605180 586 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CLRN1P58418 AP003789.1-201ENST00000617737 605 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 AC130448.2-201ENST00000624082 374 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 AL049541.2-201ENST00000626377 555 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.33□□□□□ -1.4
CLRN1P58418 AC132825.7-201ENST00000638744 335 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 METTL8-218ENST00000638989 876 ntTSL 5 BASIC6.33□□□□□ -1.4
CLRN1P58418 METTL8-219ENST00000640734 726 ntTSL 2 BASIC6.33□□□□□ -1.4
CLRN1P58418 OR7E161P-202ENST00000641994 1033 ntBASIC6.33□□□□□ -1.4
CLRN1P58418 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CLRN1P58418 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CLRN1P58418 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CLRN1P58418 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CLRN1P58418 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CLRN1P58418 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CLRN1P58418 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CLRN1P58418 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.33□□□□□ -1.4
CLRN1P58418 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.33□□□□□ -1.4
CLRN1P58418 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CLRN1P58418 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CLRN1P58418 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CLRN1P58418 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC6.33□□□□□ -1.4
CLRN1P58418 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
CLRN1P58418 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CLRN1P58418 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CLRN1P58418 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CLRN1P58418 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CLRN1P58418 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CLRN1P58418 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CLRN1P58418 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CLRN1P58418 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC6.32□□□□□ -1.4
CLRN1P58418 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CLRN1P58418 AC012321.1-201ENST00000561622 1588 ntBASIC6.32□□□□□ -1.4
CLRN1P58418 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CLRN1P58418 AC010401.2-201ENST00000575137 4934 ntBASIC6.32□□□□□ -1.4
CLRN1P58418 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CLRN1P58418 AL121949.2-201ENST00000403446 1548 ntBASIC6.32□□□□□ -1.4
CLRN1P58418 DLD-205ENST00000440410 1993 ntTSL 2 BASIC6.32□□□□□ -1.4
CLRN1P58418 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CLRN1P58418 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC6.32□□□□□ -1.4
CLRN1P58418 RN7SKP1-201ENST00000365525 307 ntBASIC6.32□□□□□ -1.4
CLRN1P58418 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC6.32□□□□□ -1.4
CLRN1P58418 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC6.32□□□□□ -1.4
CLRN1P58418 RN7SKP62-201ENST00000384539 329 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms