Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.82□□□□□ -1.32
HTTP42858 MIR4436B2-201ENST00000581415 91 ntBASIC6.82□□□□□ -1.32
HTTP42858 MIR4436B1-201ENST00000583272 91 ntBASIC6.82□□□□□ -1.32
HTTP42858 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
HTTP42858 BTBD9-201ENST00000314100 8486 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HTTP42858 PCBP2-206ENST00000455667 2741 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HTTP42858 CEP41-217ENST00000541543 6222 ntTSL 2 BASIC6.82□□□□□ -1.32
HTTP42858 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HTTP42858 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.82□□□□□ -1.32
HTTP42858 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HTTP42858 SETD7-207ENST00000608958 5281 ntTSL 5 BASIC6.82□□□□□ -1.32
HTTP42858 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.82□□□□□ -1.32
HTTP42858 CBLB-201ENST00000264122 6780 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HTTP42858 TRAF3IP2-207ENST00000368761 5128 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
HTTP42858 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
HTTP42858 SH3GLB1-205ENST00000616170 6456 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HTTP42858 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HTTP42858 AC016251.1-201ENST00000624299 4198 ntBASIC6.82□□□□□ -1.32
HTTP42858 RNA5SP156-201ENST00000410250 110 ntBASIC6.82□□□□□ -1.32
HTTP42858 RN7SKP279-201ENST00000411383 298 ntBASIC6.82□□□□□ -1.32
HTTP42858 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.82□□□□□ -1.32
HTTP42858 AC025171.4-201ENST00000607250 1047 ntBASIC6.82□□□□□ -1.32
HTTP42858 RBMXL1-202ENST00000399794 5084 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
HTTP42858 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
HTTP42858 FBXO48-201ENST00000377957 5666 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HTTP42858 AL355377.1-201ENST00000621125 1653 ntBASIC6.82□□□□□ -1.32
HTTP42858 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HTTP42858 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
HTTP42858 AC062022.1-201ENST00000451026 1684 ntBASIC6.81□□□□□ -1.32
HTTP42858 RNU105B-201ENST00000364478 208 ntBASIC6.81□□□□□ -1.32
HTTP42858 AC016739.1-201ENST00000405359 345 ntBASIC6.81□□□□□ -1.32
HTTP42858 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HTTP42858 AC079841.1-201ENST00000481228 950 ntBASIC6.81□□□□□ -1.32
HTTP42858 RPS21P4-201ENST00000487122 248 ntBASIC6.81□□□□□ -1.32
HTTP42858 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.81□□□□□ -1.32
HTTP42858 MIR4330-201ENST00000579077 105 ntBASIC6.81□□□□□ -1.32
HTTP42858 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.81□□□□□ -1.32
HTTP42858 MIR378J-201ENST00000611988 109 ntBASIC6.81□□□□□ -1.32
HTTP42858 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.81□□□□□ -1.32
HTTP42858 TNKS-201ENST00000310430 9620 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HTTP42858 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
HTTP42858 PLEC-204ENST00000354958 14751 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
HTTP42858 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
HTTP42858 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HTTP42858 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC6.81□□□□□ -1.32
HTTP42858 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HTTP42858 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HTTP42858 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC6.81□□□□□ -1.32
HTTP42858 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC6.81□□□□□ -1.32
HTTP42858 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.81□□□□□ -1.32
HTTP42858 EIF1P7-201ENST00000487533 337 ntBASIC6.81□□□□□ -1.32
HTTP42858 AC007686.1-201ENST00000488511 463 ntBASIC6.81□□□□□ -1.32
HTTP42858 AC072052.1-201ENST00000496556 306 ntBASIC6.81□□□□□ -1.32
HTTP42858 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.81□□□□□ -1.32
HTTP42858 RPL10P14-201ENST00000565265 298 ntBASIC6.81□□□□□ -1.32
HTTP42858 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.81□□□□□ -1.32
HTTP42858 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
HTTP42858 C1RL-AS1-205ENST00000541775 5272 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HTTP42858 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HTTP42858 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HTTP42858 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
HTTP42858 SLC39A9-201ENST00000031146 5192 ntTSL 5 BASIC6.81□□□□□ -1.32
HTTP42858 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
HTTP42858 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HTTP42858 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HTTP42858 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
HTTP42858 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HTTP42858 MYO6-203ENST00000369981 8692 ntTSL 5 BASIC6.81□□□□□ -1.32
HTTP42858 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
HTTP42858 MFSD8-216ENST00000641147 4009 ntBASIC6.81□□□□□ -1.32
HTTP42858 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
HTTP42858 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HTTP42858 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.81□□□□□ -1.32
HTTP42858 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.81□□□□□ -1.32
HTTP42858 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.81□□□□□ -1.32
HTTP42858 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
HTTP42858 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.81□□□□□ -1.32
HTTP42858 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.81□□□□□ -1.32
HTTP42858 AL021918.2-201ENST00000613415 194 ntBASIC6.81□□□□□ -1.32
HTTP42858 MIR6837-201ENST00000620884 64 ntBASIC6.81□□□□□ -1.32
HTTP42858 AC007683.2-201ENST00000624681 714 ntBASIC6.81□□□□□ -1.32
HTTP42858 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.81□□□□□ -1.32
HTTP42858 CACNB2-216ENST00000617363 4385 ntTSL 5 BASIC6.8□□□□□ -1.32
HTTP42858 SON-203ENST00000381679 7860 ntTSL 5 BASIC6.8□□□□□ -1.32
HTTP42858 ZMYM3-201ENST00000314425 5536 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
HTTP42858 SPATA13-202ENST00000382095 6665 ntAPPRIS P3 TSL 2 BASIC6.8□□□□□ -1.32
HTTP42858 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HTTP42858 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HTTP42858 PTAFR-202ENST00000373857 4491 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HTTP42858 PTCH1-205ENST00000418258 7815 ntTSL 5 BASIC6.8□□□□□ -1.32
HTTP42858 ASPA-201ENST00000263080 5431 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HTTP42858 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HTTP42858 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
HTTP42858 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
HTTP42858 AC005042.1-201ENST00000393397 800 ntBASIC6.8□□□□□ -1.32
HTTP42858 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.8□□□□□ -1.32
HTTP42858 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC6.8□□□□□ -1.32
HTTP42858 AC117395.1-201ENST00000487390 403 ntBASIC6.8□□□□□ -1.32
HTTP42858 OR51A1P-201ENST00000511110 946 ntBASIC6.8□□□□□ -1.32
HTTP42858 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms