Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
NPIPA3F8WFD2 RN7SL187P-201ENST00000495587 303 ntBASIC6.12□□□□□ -1.43
NPIPA3F8WFD2 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.12□□□□□ -1.43
NPIPA3F8WFD2 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
NPIPA3F8WFD2 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.12□□□□□ -1.43
NPIPA3F8WFD2 AC026774.2-201ENST00000513990 1098 ntBASIC6.12□□□□□ -1.43
NPIPA3F8WFD2 AC011352.2-201ENST00000514574 1016 ntBASIC6.12□□□□□ -1.43
NPIPA3F8WFD2 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.12□□□□□ -1.43
NPIPA3F8WFD2 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.12□□□□□ -1.43
NPIPA3F8WFD2 AC007068.2-201ENST00000543168 395 ntBASIC6.12□□□□□ -1.43
NPIPA3F8WFD2 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.12□□□□□ -1.43
NPIPA3F8WFD2 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
NPIPA3F8WFD2 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.12□□□□□ -1.43
NPIPA3F8WFD2 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.12□□□□□ -1.43
NPIPA3F8WFD2 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NPIPA3F8WFD2 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NPIPA3F8WFD2 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.12□□□□□ -1.43
NPIPA3F8WFD2 AC011500.1-201ENST00000601963 469 ntBASIC6.12□□□□□ -1.43
NPIPA3F8WFD2 NDUFB9P1-201ENST00000604683 510 ntBASIC6.12□□□□□ -1.43
NPIPA3F8WFD2 AL035410.2-201ENST00000604963 864 ntBASIC6.12□□□□□ -1.43
NPIPA3F8WFD2 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.12□□□□□ -1.43
NPIPA3F8WFD2 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.12□□□□□ -1.43
NPIPA3F8WFD2 AL357153.4-201ENST00000620487 1016 ntBASIC6.12□□□□□ -1.43
NPIPA3F8WFD2 AC119674.1-204ENST00000641348 1343 ntBASIC6.12□□□□□ -1.43
NPIPA3F8WFD2 AC138627.1-204ENST00000641894 765 ntBASIC6.12□□□□□ -1.43
NPIPA3F8WFD2 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NPIPA3F8WFD2 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 AC022819.1-201ENST00000563495 3910 ntBASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 TATDN2P3-201ENST00000452855 3665 ntBASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 AC090181.3-201ENST00000624777 1514 ntBASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 SYT14P1-202ENST00000600441 1448 ntBASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 MIR541-201ENST00000401360 84 ntBASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 BMP6P1-201ENST00000431230 679 ntBASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 AC128677.1-201ENST00000436016 442 ntBASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 AC083806.1-201ENST00000468934 316 ntBASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 AC253576.1-201ENST00000511645 1156 ntBASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 AC122713.1-201ENST00000518368 1015 ntBASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 SNORA70D-201ENST00000578836 135 ntBASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 AC091768.1-201ENST00000609258 930 ntBASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 AL132796.3-201ENST00000624703 900 ntBASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 RPSAP68-201ENST00000625020 438 ntBASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NPIPA3F8WFD2 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 RPL24P4-201ENST00000326586 421 ntBASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 RN7SKP250-201ENST00000363924 321 ntBASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 RNA5SP85-201ENST00000365378 119 ntBASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms