Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC8.8□□□□□ -1
SCUBE3Q8IX30 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC8.8□□□□□ -1
SCUBE3Q8IX30 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC8.8□□□□□ -1
SCUBE3Q8IX30 AL133457.1-201ENST00000564251 987 ntBASIC8.8□□□□□ -1
SCUBE3Q8IX30 EIF4A1P9-201ENST00000576035 1207 ntBASIC8.8□□□□□ -1
SCUBE3Q8IX30 MIR5708-201ENST00000579723 85 ntBASIC8.8□□□□□ -1
SCUBE3Q8IX30 RN7SL49P-201ENST00000581392 298 ntBASIC8.8□□□□□ -1
SCUBE3Q8IX30 RN7SL619P-201ENST00000581753 258 ntBASIC8.8□□□□□ -1
SCUBE3Q8IX30 RN7SL664P-201ENST00000584239 305 ntBASIC8.8□□□□□ -1
SCUBE3Q8IX30 AC096708.1-201ENST00000584419 658 ntBASIC8.8□□□□□ -1
SCUBE3Q8IX30 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC8.8□□□□□ -1
SCUBE3Q8IX30 AL360085.1-201ENST00000604713 532 ntBASIC8.8□□□□□ -1
SCUBE3Q8IX30 AP004372.1-201ENST00000604842 844 ntBASIC8.8□□□□□ -1
SCUBE3Q8IX30 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC8.8□□□□□ -1
SCUBE3Q8IX30 AC009686.2-201ENST00000607017 577 ntBASIC8.8□□□□□ -1
SCUBE3Q8IX30 MIR7156-201ENST00000620979 60 ntBASIC8.8□□□□□ -1
SCUBE3Q8IX30 LINC01739-205ENST00000641890 573 ntBASIC8.8□□□□□ -1
SCUBE3Q8IX30 GNA12-203ENST00000407904 3918 ntTSL 2 BASIC8.8□□□□□ -1
SCUBE3Q8IX30 SAMM50P1-201ENST00000455403 1399 ntBASIC8.8□□□□□ -1
SCUBE3Q8IX30 MMP13-202ENST00000340273 1470 ntTSL 1 (best) BASIC8.8□□□□□ -1
SCUBE3Q8IX30 MTTP-208ENST00000511045 3154 ntTSL 2 BASIC8.8□□□□□ -1
SCUBE3Q8IX30 RRM2-201ENST00000304567 3271 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SCUBE3Q8IX30 BRDT-205ENST00000399546 3357 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
SCUBE3Q8IX30 ZNF569-202ENST00000392149 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SCUBE3Q8IX30 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SCUBE3Q8IX30 CYCS-201ENST00000305786 4098 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SCUBE3Q8IX30 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC8.8□□□□□ -1
SCUBE3Q8IX30 SLFN11-202ENST00000394566 5030 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
SCUBE3Q8IX30 PTGS2-201ENST00000367468 4514 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SCUBE3Q8IX30 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SCUBE3Q8IX30 SCNN1G-201ENST00000300061 3507 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SCUBE3Q8IX30 CTNNA1-210ENST00000518825 3536 ntTSL 1 (best) BASIC8.8□□□□□ -1
SCUBE3Q8IX30 C1orf158-203ENST00000614859 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SCUBE3Q8IX30 PIGP-202ENST00000360525 6998 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SCUBE3Q8IX30 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SCUBE3Q8IX30 AC007638.2-201ENST00000574716 1740 ntTSL 2 BASIC8.8□□□□□ -1
SCUBE3Q8IX30 LINC01260-201ENST00000415889 1416 ntTSL 5 BASIC8.8□□□□□ -1
SCUBE3Q8IX30 HCG18-238ENST00000449544 4262 ntTSL 2 BASIC8.8□□□□□ -1
SCUBE3Q8IX30 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
SCUBE3Q8IX30 SYTL4-204ENST00000372989 3885 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SCUBE3Q8IX30 FAM13C-215ENST00000614220 3388 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 ZMIZ1-AS1-201ENST00000428862 2851 ntTSL 5 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 ZNF3-202ENST00000299667 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
SCUBE3Q8IX30 ABCB1-210ENST00000543898 4524 ntTSL 5 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 ELAVL2-203ENST00000380117 2370 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
SCUBE3Q8IX30 MRAS-211ENST00000621127 3801 ntTSL 5 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
SCUBE3Q8IX30 ZNF331-216ENST00000511593 1985 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 AC106869.1-203ENST00000419035 1892 ntTSL 2 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 LAX1-203ENST00000442561 3023 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
SCUBE3Q8IX30 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC8.79□□□□□ -1
SCUBE3Q8IX30 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 NLRP5-201ENST00000390649 3888 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
SCUBE3Q8IX30 NLRP5-203ENST00000621651 3885 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 PIEZO2-203ENST00000503781 8259 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
SCUBE3Q8IX30 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 AC097662.1-204ENST00000396588 2214 ntTSL 2 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.79□□□□□ -1
SCUBE3Q8IX30 Y_RNA.160-201ENST00000363677 92 ntBASIC8.79□□□□□ -1
SCUBE3Q8IX30 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.79□□□□□ -1
SCUBE3Q8IX30 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.79□□□□□ -1
SCUBE3Q8IX30 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 LINC01799-201ENST00000411701 386 ntTSL 3 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 AL022724.1-201ENST00000412132 554 ntTSL 3 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 AL157698.1-201ENST00000415190 1011 ntBASIC8.79□□□□□ -1
SCUBE3Q8IX30 OCM-202ENST00000416608 623 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 LINC02088-201ENST00000428134 620 ntTSL 3 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 AC007683.1-201ENST00000432746 591 ntBASIC8.79□□□□□ -1
SCUBE3Q8IX30 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 AL035458.1-201ENST00000433096 585 ntBASIC8.79□□□□□ -1
SCUBE3Q8IX30 AC244102.1-201ENST00000437309 848 ntTSL 3 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 CICP10-201ENST00000439497 198 ntBASIC8.79□□□□□ -1
SCUBE3Q8IX30 FUNDC2P4-201ENST00000441207 421 ntBASIC8.79□□□□□ -1
SCUBE3Q8IX30 RPL23AP76-201ENST00000441860 458 ntBASIC8.79□□□□□ -1
SCUBE3Q8IX30 ARL5AP2-201ENST00000444698 533 ntBASIC8.79□□□□□ -1
SCUBE3Q8IX30 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 SFTPA3P-201ENST00000446429 367 ntBASIC8.79□□□□□ -1
SCUBE3Q8IX30 DDX39BP2-208ENST00000453923 258 ntBASIC8.79□□□□□ -1
SCUBE3Q8IX30 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 AC114967.1-201ENST00000504890 259 ntBASIC8.79□□□□□ -1
SCUBE3Q8IX30 PPM1K-204ENST00000508256 923 ntTSL 2 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 AC114786.4-201ENST00000508771 728 ntBASIC8.79□□□□□ -1
SCUBE3Q8IX30 AC096661.1-201ENST00000515870 822 ntBASIC8.79□□□□□ -1
SCUBE3Q8IX30 MAL2-205ENST00000521048 575 ntTSL 4 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 NACA2-201ENST00000521764 777 ntAPPRIS P1 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 AP003080.1-202ENST00000526526 915 ntBASIC8.79□□□□□ -1
SCUBE3Q8IX30 AC022690.1-201ENST00000526681 550 ntBASIC8.79□□□□□ -1
SCUBE3Q8IX30 RGS5-219ENST00000528019 512 ntTSL 4 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 AP006587.2-201ENST00000530696 493 ntBASIC8.79□□□□□ -1
SCUBE3Q8IX30 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC8.79□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 149.5 ms