Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
PTPN9P43378 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PTPN9P43378 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
PTPN9P43378 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
PTPN9P43378 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
PTPN9P43378 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.93□□□□□ -1.3
PTPN9P43378 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PTPN9P43378 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
PTPN9P43378 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PTPN9P43378 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
PTPN9P43378 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
PTPN9P43378 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PTPN9P43378 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
PTPN9P43378 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PTPN9P43378 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PTPN9P43378 RNU1-46P-201ENST00000384425 164 ntBASIC6.92□□□□□ -1.3
PTPN9P43378 AC019178.1-201ENST00000392337 440 ntBASIC6.92□□□□□ -1.3
PTPN9P43378 AC026310.1-201ENST00000396004 378 ntBASIC6.92□□□□□ -1.3
PTPN9P43378 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC6.92□□□□□ -1.3
PTPN9P43378 AL929472.1-201ENST00000417484 429 ntBASIC6.92□□□□□ -1.3
PTPN9P43378 RPL36P18-201ENST00000419316 318 ntBASIC6.92□□□□□ -1.3
PTPN9P43378 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.92□□□□□ -1.3
PTPN9P43378 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC6.92□□□□□ -1.3
PTPN9P43378 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.92□□□□□ -1.3
PTPN9P43378 RPL5P12-201ENST00000477071 851 ntBASIC6.92□□□□□ -1.3
PTPN9P43378 MTCO1P55-201ENST00000489829 745 ntBASIC6.92□□□□□ -1.3
PTPN9P43378 RN7SL37P-201ENST00000490461 307 ntBASIC6.92□□□□□ -1.3
PTPN9P43378 AP000926.3-201ENST00000497201 299 ntBASIC6.92□□□□□ -1.3
PTPN9P43378 AC122714.1-201ENST00000502510 459 ntBASIC6.92□□□□□ -1.3
PTPN9P43378 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC6.92□□□□□ -1.3
PTPN9P43378 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.92□□□□□ -1.3
PTPN9P43378 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC6.92□□□□□ -1.3
PTPN9P43378 RNA5SP96-201ENST00000516041 107 ntBASIC6.92□□□□□ -1.3
PTPN9P43378 AC073581.1-201ENST00000519036 575 ntBASIC6.92□□□□□ -1.3
PTPN9P43378 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.92□□□□□ -1.3
PTPN9P43378 IGLV3-6-201ENST00000523937 250 ntBASIC6.92□□□□□ -1.3
PTPN9P43378 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.92□□□□□ -1.3
PTPN9P43378 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.92□□□□□ -1.3
PTPN9P43378 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.92□□□□□ -1.3
PTPN9P43378 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6.92□□□□□ -1.3
PTPN9P43378 AC139792.1-201ENST00000607051 647 ntBASIC6.92□□□□□ -1.3
PTPN9P43378 AC093635.1-201ENST00000609028 555 ntBASIC6.92□□□□□ -1.3
PTPN9P43378 AP002345.2-201ENST00000609961 904 ntBASIC6.92□□□□□ -1.3
PTPN9P43378 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.92□□□□□ -1.3
PTPN9P43378 AC114546.4-201ENST00000624413 369 ntBASIC6.92□□□□□ -1.3
PTPN9P43378 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
PTPN9P43378 AC027559.1-201ENST00000636288 271 ntBASIC6.92□□□□□ -1.3
PTPN9P43378 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.92□□□□□ -1.3
PTPN9P43378 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PTPN9P43378 AC007406.5-201ENST00000570140 3170 ntBASIC6.92□□□□□ -1.3
PTPN9P43378 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PTPN9P43378 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.92□□□□□ -1.3
PTPN9P43378 AC007998.4-201ENST00000612496 2533 ntBASIC6.92□□□□□ -1.3
PTPN9P43378 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.92□□□□□ -1.3
PTPN9P43378 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PTPN9P43378 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.92□□□□□ -1.3
PTPN9P43378 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.92□□□□□ -1.3
PTPN9P43378 AC008957.3-201ENST00000624112 2242 ntBASIC6.92□□□□□ -1.3
PTPN9P43378 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
PTPN9P43378 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PTPN9P43378 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PTPN9P43378 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.91□□□□□ -1.3
PTPN9P43378 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
PTPN9P43378 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PTPN9P43378 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.91□□□□□ -1.3
PTPN9P43378 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PTPN9P43378 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.91□□□□□ -1.3
PTPN9P43378 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.91□□□□□ -1.3
PTPN9P43378 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
PTPN9P43378 CASC19-228ENST00000641414 1684 ntBASIC6.91□□□□□ -1.3
PTPN9P43378 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.91□□□□□ -1.3
PTPN9P43378 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PTPN9P43378 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PTPN9P43378 AP002833.3-201ENST00000625075 2265 ntBASIC6.91□□□□□ -1.3
PTPN9P43378 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
PTPN9P43378 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.91□□□□□ -1.3
PTPN9P43378 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
PTPN9P43378 RNA5SP188-201ENST00000362916 129 ntBASIC6.91□□□□□ -1.3
PTPN9P43378 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.91□□□□□ -1.3
PTPN9P43378 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PTPN9P43378 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PTPN9P43378 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
PTPN9P43378 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PTPN9P43378 AL359092.1-201ENST00000417156 265 ntBASIC6.91□□□□□ -1.3
PTPN9P43378 CDC42P6-201ENST00000421246 576 ntBASIC6.91□□□□□ -1.3
PTPN9P43378 CYCSP52-201ENST00000422857 310 ntBASIC6.91□□□□□ -1.3
PTPN9P43378 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PTPN9P43378 Z68868.1-201ENST00000429048 544 ntBASIC6.91□□□□□ -1.3
PTPN9P43378 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.91□□□□□ -1.3
PTPN9P43378 UBE2V2P1-201ENST00000434717 398 ntBASIC6.91□□□□□ -1.3
PTPN9P43378 AL136455.1-201ENST00000441083 1240 ntBASIC6.91□□□□□ -1.3
PTPN9P43378 GAPDHP33-201ENST00000443168 1013 ntBASIC6.91□□□□□ -1.3
PTPN9P43378 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC6.91□□□□□ -1.3
PTPN9P43378 RPL23AP64-201ENST00000469465 435 ntBASIC6.91□□□□□ -1.3
PTPN9P43378 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PTPN9P43378 RN7SL70P-201ENST00000478322 302 ntBASIC6.91□□□□□ -1.3
PTPN9P43378 MINOS1P4-201ENST00000515470 318 ntBASIC6.91□□□□□ -1.3
PTPN9P43378 AL162632.2-201ENST00000553933 399 ntBASIC6.91□□□□□ -1.3
PTPN9P43378 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.91□□□□□ -1.3
PTPN9P43378 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms