Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CXCL1P09341 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.02□□□□□ -1.61
CXCL1P09341 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CXCL1P09341 FGG-204ENST00000405164 1539 ntTSL 5 BASIC5.02□□□□□ -1.61
CXCL1P09341 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CXCL1P09341 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CXCL1P09341 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CXCL1P09341 AC022613.3-201ENST00000560740 1346 ntBASIC5.01□□□□□ -1.61
CXCL1P09341 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.01□□□□□ -1.61
CXCL1P09341 ZNF969P-201ENST00000510345 2341 ntBASIC5.01□□□□□ -1.61
CXCL1P09341 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CXCL1P09341 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CXCL1P09341 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CXCL1P09341 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CXCL1P09341 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CXCL1P09341 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CXCL1P09341 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CXCL1P09341 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CXCL1P09341 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC5.01□□□□□ -1.61
CXCL1P09341 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.01□□□□□ -1.61
CXCL1P09341 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.01□□□□□ -1.61
CXCL1P09341 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC5.01□□□□□ -1.61
CXCL1P09341 AL663061.1-201ENST00000416625 580 ntBASIC5.01□□□□□ -1.61
CXCL1P09341 AC069213.1-202ENST00000417011 810 ntTSL 2 BASIC5.01□□□□□ -1.61
CXCL1P09341 TRBV30-201ENST00000417977 447 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CXCL1P09341 CHCHD3P1-201ENST00000425516 676 ntBASIC5.01□□□□□ -1.61
CXCL1P09341 MTRF1-204ENST00000430347 557 ntTSL 5 BASIC5.01□□□□□ -1.61
CXCL1P09341 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC5.01□□□□□ -1.61
CXCL1P09341 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CXCL1P09341 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC5.01□□□□□ -1.61
CXCL1P09341 AC079922.1-201ENST00000443291 359 ntBASIC5.01□□□□□ -1.61
CXCL1P09341 RN7SL338P-201ENST00000481467 293 ntBASIC5.01□□□□□ -1.61
CXCL1P09341 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC5.01□□□□□ -1.61
CXCL1P09341 IGKV2OR22-4-201ENST00000523309 367 ntBASIC5.01□□□□□ -1.61
CXCL1P09341 AP003499.1-201ENST00000527217 574 ntBASIC5.01□□□□□ -1.61
CXCL1P09341 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CXCL1P09341 AL121579.2-201ENST00000555466 590 ntBASIC5.01□□□□□ -1.61
CXCL1P09341 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC5.01□□□□□ -1.61
CXCL1P09341 AC106785.4-201ENST00000569492 412 ntBASIC5.01□□□□□ -1.61
CXCL1P09341 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC5.01□□□□□ -1.61
CXCL1P09341 KIAA1328-209ENST00000592521 1190 ntTSL 2 BASIC5.01□□□□□ -1.61
CXCL1P09341 AC010615.2-205ENST00000599993 929 ntTSL 2 BASIC5.01□□□□□ -1.61
CXCL1P09341 AL157899.1-201ENST00000604110 936 ntBASIC5.01□□□□□ -1.61
CXCL1P09341 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC5.01□□□□□ -1.61
CXCL1P09341 AL445649.1-201ENST00000615941 691 ntBASIC5.01□□□□□ -1.61
CXCL1P09341 AL132821.1-201ENST00000616029 394 ntBASIC5.01□□□□□ -1.61
CXCL1P09341 AL360169.2-201ENST00000619713 561 ntTSL 5 BASIC5.01□□□□□ -1.61
CXCL1P09341 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.01□□□□□ -1.61
CXCL1P09341 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.01□□□□□ -1.61
CXCL1P09341 AL121936.2-201ENST00000641935 662 ntBASIC5.01□□□□□ -1.61
CXCL1P09341 AC105235.1-201ENST00000623208 1816 ntBASIC5.01□□□□□ -1.61
CXCL1P09341 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CXCL1P09341 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CXCL1P09341 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CXCL1P09341 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.01□□□□□ -1.61
CXCL1P09341 USP9YP3-201ENST00000434481 1766 ntBASIC5.01□□□□□ -1.61
CXCL1P09341 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.01□□□□□ -1.61
CXCL1P09341 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5□□□□□ -1.61
CXCL1P09341 AOX3P-204ENST00000491025 2107 ntBASIC5□□□□□ -1.61
CXCL1P09341 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
CXCL1P09341 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CXCL1P09341 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CXCL1P09341 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CXCL1P09341 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC5□□□□□ -1.61
CXCL1P09341 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CXCL1P09341 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5□□□□□ -1.61
CXCL1P09341 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CXCL1P09341 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CXCL1P09341 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5□□□□□ -1.61
CXCL1P09341 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5□□□□□ -1.61
CXCL1P09341 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
CXCL1P09341 RN7SKP81-201ENST00000365603 331 ntBASIC5□□□□□ -1.61
CXCL1P09341 HIST1H2BPS2-201ENST00000402707 340 ntBASIC5□□□□□ -1.61
CXCL1P09341 PSG11-203ENST00000403486 1163 ntTSL 2 BASIC5□□□□□ -1.61
CXCL1P09341 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC5□□□□□ -1.61
CXCL1P09341 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC5□□□□□ -1.61
CXCL1P09341 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5□□□□□ -1.61
CXCL1P09341 VTI1BP4-201ENST00000427516 527 ntBASIC5□□□□□ -1.61
CXCL1P09341 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC5□□□□□ -1.61
CXCL1P09341 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC5□□□□□ -1.61
CXCL1P09341 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC5□□□□□ -1.61
CXCL1P09341 ZNF337-AS1-206ENST00000455791 650 ntTSL 3 BASIC5□□□□□ -1.61
CXCL1P09341 AC010878.1-201ENST00000456500 1047 ntBASIC5□□□□□ -1.61
CXCL1P09341 RN7SL508P-201ENST00000464472 303 ntBASIC5□□□□□ -1.61
CXCL1P09341 RN7SL221P-201ENST00000466190 281 ntBASIC5□□□□□ -1.61
CXCL1P09341 AC091982.1-202ENST00000473923 343 ntBASIC5□□□□□ -1.61
CXCL1P09341 MYL6P4-201ENST00000477911 453 ntBASIC5□□□□□ -1.61
CXCL1P09341 AC093719.1-201ENST00000480427 441 ntBASIC5□□□□□ -1.61
CXCL1P09341 AL035690.1-201ENST00000490892 383 ntBASIC5□□□□□ -1.61
CXCL1P09341 NPM1P28-201ENST00000492269 840 ntBASIC5□□□□□ -1.61
CXCL1P09341 AC021146.11-201ENST00000503319 491 ntBASIC5□□□□□ -1.61
CXCL1P09341 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC5□□□□□ -1.61
CXCL1P09341 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC5□□□□□ -1.61
CXCL1P09341 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
CXCL1P09341 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5□□□□□ -1.61
CXCL1P09341 AP003122.2-201ENST00000527332 486 ntTSL 3 BASIC5□□□□□ -1.61
CXCL1P09341 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5□□□□□ -1.61
CXCL1P09341 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5□□□□□ -1.61
CXCL1P09341 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC5□□□□□ -1.61
CXCL1P09341 OR4F28P-201ENST00000559128 938 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms