Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RETP07949 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
RETP07949 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.85□□□□□ -1.31
RETP07949 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RETP07949 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
RETP07949 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RETP07949 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RETP07949 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
RETP07949 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
RETP07949 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.84□□□□□ -1.31
RETP07949 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RETP07949 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.84□□□□□ -1.31
RETP07949 PRNCR1-201ENST00000635449 12727 ntBASIC6.84□□□□□ -1.31
RETP07949 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.84□□□□□ -1.31
RETP07949 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.84□□□□□ -1.31
RETP07949 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
RETP07949 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.84□□□□□ -1.31
RETP07949 RN7SKP107-201ENST00000364157 290 ntBASIC6.84□□□□□ -1.31
RETP07949 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC6.84□□□□□ -1.31
RETP07949 UBBP1-201ENST00000392399 473 ntBASIC6.84□□□□□ -1.31
RETP07949 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RETP07949 RPS10P21-201ENST00000430654 475 ntBASIC6.84□□□□□ -1.31
RETP07949 AC110602.1-201ENST00000437414 318 ntBASIC6.84□□□□□ -1.31
RETP07949 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.84□□□□□ -1.31
RETP07949 COL11A2P1-205ENST00000441798 676 ntBASIC6.84□□□□□ -1.31
RETP07949 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.84□□□□□ -1.31
RETP07949 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
RETP07949 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.84□□□□□ -1.31
RETP07949 RN7SL88P-201ENST00000480166 299 ntBASIC6.84□□□□□ -1.31
RETP07949 OR51A1P-201ENST00000511110 946 ntBASIC6.84□□□□□ -1.31
RETP07949 RNA5SP441-201ENST00000516809 88 ntBASIC6.84□□□□□ -1.31
RETP07949 AC007537.1-201ENST00000539347 327 ntBASIC6.84□□□□□ -1.31
RETP07949 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.84□□□□□ -1.31
RETP07949 MIR4443-201ENST00000585052 53 ntBASIC6.84□□□□□ -1.31
RETP07949 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.84□□□□□ -1.31
RETP07949 AL138895.2-201ENST00000603019 178 ntBASIC6.84□□□□□ -1.31
RETP07949 AC023513.1-201ENST00000604396 691 ntBASIC6.84□□□□□ -1.31
RETP07949 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.84□□□□□ -1.31
RETP07949 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.84□□□□□ -1.31
RETP07949 SNX18P10-201ENST00000625014 519 ntBASIC6.84□□□□□ -1.31
RETP07949 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.84□□□□□ -1.31
RETP07949 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
RETP07949 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
RETP07949 AC132219.2-201ENST00000624416 2327 ntBASIC6.84□□□□□ -1.31
RETP07949 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.84□□□□□ -1.31
RETP07949 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
RETP07949 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
RETP07949 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC6.84□□□□□ -1.31
RETP07949 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.84□□□□□ -1.32
RETP07949 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
RETP07949 AC007993.1-201ENST00000621298 2430 ntBASIC6.84□□□□□ -1.32
RETP07949 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RETP07949 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
RETP07949 AL021877.2-201ENST00000624442 10684 ntBASIC6.83□□□□□ -1.32
RETP07949 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.83□□□□□ -1.32
RETP07949 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RETP07949 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC6.83□□□□□ -1.32
RETP07949 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RETP07949 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RETP07949 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RETP07949 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
RETP07949 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RETP07949 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RETP07949 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
RETP07949 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RETP07949 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
RETP07949 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RETP07949 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RETP07949 API5P1-201ENST00000424316 1510 ntBASIC6.83□□□□□ -1.32
RETP07949 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RETP07949 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RETP07949 RNU6-1017P-201ENST00000363613 106 ntBASIC6.83□□□□□ -1.32
RETP07949 RN7SKP275-201ENST00000364626 301 ntBASIC6.83□□□□□ -1.32
RETP07949 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.83□□□□□ -1.32
RETP07949 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RETP07949 YWHAZP6-201ENST00000399764 738 ntBASIC6.83□□□□□ -1.32
RETP07949 AL451046.1-201ENST00000406097 534 ntBASIC6.83□□□□□ -1.32
RETP07949 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.83□□□□□ -1.32
RETP07949 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.83□□□□□ -1.32
RETP07949 RN7SKP206-201ENST00000410823 293 ntBASIC6.83□□□□□ -1.32
RETP07949 VN1R20P-201ENST00000425215 966 ntBASIC6.83□□□□□ -1.32
RETP07949 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.83□□□□□ -1.32
RETP07949 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.83□□□□□ -1.32
RETP07949 GTF2IP14-201ENST00000441415 586 ntBASIC6.83□□□□□ -1.32
RETP07949 SNRPBP1-201ENST00000443634 282 ntBASIC6.83□□□□□ -1.32
RETP07949 RN7SL552P-201ENST00000462094 276 ntBASIC6.83□□□□□ -1.32
RETP07949 AP000805.1-201ENST00000471604 784 ntBASIC6.83□□□□□ -1.32
RETP07949 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.83□□□□□ -1.32
RETP07949 AP005202.1-201ENST00000489915 867 ntBASIC6.83□□□□□ -1.32
RETP07949 AC104109.1-201ENST00000498563 436 ntBASIC6.83□□□□□ -1.32
RETP07949 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC6.83□□□□□ -1.32
RETP07949 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.83□□□□□ -1.32
RETP07949 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.83□□□□□ -1.32
RETP07949 AC002519.2-203ENST00000567043 837 ntBASIC6.83□□□□□ -1.32
RETP07949 ANP32BP1-202ENST00000568553 737 ntBASIC6.83□□□□□ -1.32
RETP07949 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC6.83□□□□□ -1.32
RETP07949 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.83□□□□□ -1.32
RETP07949 AL355333.1-201ENST00000605632 279 ntBASIC6.83□□□□□ -1.32
RETP07949 AP005212.3-201ENST00000619964 528 ntBASIC6.83□□□□□ -1.32
RETP07949 RAB28P4-201ENST00000622233 665 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms