Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC5.84□□□□□ -1.48
RHBDD3Q9Y3P4 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.84□□□□□ -1.48
RHBDD3Q9Y3P4 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
RHBDD3Q9Y3P4 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
RHBDD3Q9Y3P4 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
RHBDD3Q9Y3P4 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.84□□□□□ -1.48
RHBDD3Q9Y3P4 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
RHBDD3Q9Y3P4 WBP11P1-201ENST00000562560 1931 ntBASIC5.84□□□□□ -1.48
RHBDD3Q9Y3P4 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 STAG3L4-201ENST00000352103 530 ntBASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 RNU1-56P-201ENST00000391303 164 ntBASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 RPL31-202ENST00000409000 641 ntTSL 2 BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 SETP9-201ENST00000423837 832 ntBASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 RN7SL216P-201ENST00000471607 298 ntBASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 RPL23AP68-201ENST00000480924 445 ntBASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 RPL23AP80-201ENST00000495605 424 ntBASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 RPL10P7-201ENST00000495649 625 ntBASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 RNA5SP116-201ENST00000516132 98 ntBASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 CASC11-203ENST00000519071 791 ntTSL 3 BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 PPIAP6-201ENST00000557078 499 ntBASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 RN7SL689P-201ENST00000577215 297 ntBASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 AC137695.1-201ENST00000604126 489 ntBASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 CNTNAP3P1-201ENST00000616657 906 ntBASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 AL121985.3-201ENST00000620690 523 ntBASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 AC012653.2-201ENST00000621880 420 ntBASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 AL353684.1-201ENST00000622677 1120 ntBASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 AC017037.4-201ENST00000624526 826 ntBASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 AC073857.1-201ENST00000625082 1054 ntBASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 AP002370.1-201ENST00000528055 1602 ntBASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RHBDD3Q9Y3P4 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 AC093844.1-201ENST00000514910 1361 ntBASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 TRIM53CP-201ENST00000531490 1354 ntBASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 MIR99A-201ENST00000384906 81 ntBASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 TRAV35-201ENST00000390462 330 ntBASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 NACAP7-201ENST00000407371 609 ntBASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 RN7SKP117-201ENST00000410175 264 ntBASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 NFU1P1-201ENST00000413128 774 ntBASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 MICG-208ENST00000416822 132 ntBASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 AC239367.3-201ENST00000428996 814 ntBASIC5.82□□□□□ -1.48
RHBDD3Q9Y3P4 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms