Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
CHD7Q9P2D1 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.56□□□□□ -1.36
CHD7Q9P2D1 RPL34P3-201ENST00000421454 338 ntBASIC6.56□□□□□ -1.36
CHD7Q9P2D1 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.56□□□□□ -1.36
CHD7Q9P2D1 AC092865.4-201ENST00000477936 615 ntBASIC6.56□□□□□ -1.36
CHD7Q9P2D1 RN7SL547P-201ENST00000490793 290 ntBASIC6.56□□□□□ -1.36
CHD7Q9P2D1 AC090958.1-201ENST00000511122 351 ntBASIC6.56□□□□□ -1.36
CHD7Q9P2D1 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.56□□□□□ -1.36
CHD7Q9P2D1 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHD7Q9P2D1 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.56□□□□□ -1.36
CHD7Q9P2D1 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHD7Q9P2D1 AC138915.4-201ENST00000565549 4147 ntBASIC6.56□□□□□ -1.36
CHD7Q9P2D1 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHD7Q9P2D1 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
CHD7Q9P2D1 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHD7Q9P2D1 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
CHD7Q9P2D1 MAPK10-365ENST00000641902 3825 ntBASIC6.56□□□□□ -1.36
CHD7Q9P2D1 AR-201ENST00000374690 10652 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHD7Q9P2D1 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC6.56□□□□□ -1.36
CHD7Q9P2D1 LPIN1-207ENST00000425416 5582 ntTSL 2 BASIC6.56□□□□□ -1.36
CHD7Q9P2D1 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CHD7Q9P2D1 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.56□□□□□ -1.36
CHD7Q9P2D1 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.56□□□□□ -1.36
CHD7Q9P2D1 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.56□□□□□ -1.36
CHD7Q9P2D1 SETP21-201ENST00000514799 892 ntBASIC6.56□□□□□ -1.36
CHD7Q9P2D1 AC011416.1-201ENST00000514947 1732 ntBASIC6.56□□□□□ -1.36
CHD7Q9P2D1 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.56□□□□□ -1.36
CHD7Q9P2D1 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.56□□□□□ -1.36
CHD7Q9P2D1 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.56□□□□□ -1.36
CHD7Q9P2D1 AC022404.1-201ENST00000555320 273 ntBASIC6.56□□□□□ -1.36
CHD7Q9P2D1 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHD7Q9P2D1 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.56□□□□□ -1.36
CHD7Q9P2D1 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.56□□□□□ -1.36
CHD7Q9P2D1 AC027088.4-201ENST00000611559 1947 ntBASIC6.56□□□□□ -1.36
CHD7Q9P2D1 AC092724.1-201ENST00000624623 3397 ntBASIC6.56□□□□□ -1.36
CHD7Q9P2D1 AC022919.1-201ENST00000624979 626 ntBASIC6.56□□□□□ -1.36
CHD7Q9P2D1 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHD7Q9P2D1 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC6.56□□□□□ -1.36
CHD7Q9P2D1 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHD7Q9P2D1 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHD7Q9P2D1 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 LINC01694-202ENST00000441095 6721 ntTSL 3 BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 WDR95P-201ENST00000425638 1542 ntBASIC6.55□□□□□ -1.36
CHD7Q9P2D1 AP000534.2-201ENST00000412729 568 ntBASIC6.55□□□□□ -1.36
CHD7Q9P2D1 RN7SL269P-201ENST00000467795 305 ntBASIC6.55□□□□□ -1.36
CHD7Q9P2D1 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 IGHV3-57-201ENST00000520143 280 ntBASIC6.55□□□□□ -1.36
CHD7Q9P2D1 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 AL139407.1-201ENST00000613826 1175 ntBASIC6.55□□□□□ -1.36
CHD7Q9P2D1 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 CACNA1E-201ENST00000357570 7064 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 CACNA1E-206ENST00000367573 7067 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 LGALS8-212ENST00000450372 6281 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 ATP2B2-203ENST00000383800 8900 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 Z82209.2-201ENST00000623410 2012 ntBASIC6.55□□□□□ -1.36
CHD7Q9P2D1 AC117409.1-201ENST00000470499 1310 ntBASIC6.55□□□□□ -1.36
CHD7Q9P2D1 RNA5SP234-201ENST00000363916 119 ntBASIC6.55□□□□□ -1.36
CHD7Q9P2D1 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 SNORA70.20-201ENST00000516848 126 ntBASIC6.55□□□□□ -1.36
CHD7Q9P2D1 WBP1LP3-201ENST00000523033 208 ntBASIC6.55□□□□□ -1.36
CHD7Q9P2D1 IGLV3-6-201ENST00000523937 250 ntBASIC6.55□□□□□ -1.36
CHD7Q9P2D1 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 AC037198.3-201ENST00000616754 526 ntBASIC6.55□□□□□ -1.36
CHD7Q9P2D1 AFF1-202ENST00000395146 9285 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 CLTC-215ENST00000621829 8587 ntAPPRIS ALT1 TSL 2 BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 LINC00963-202ENST00000419300 9557 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 GPBP1-208ENST00000514387 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 LGALS8-219ENST00000526589 6420 ntAPPRIS P4 TSL 5 BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 SLC25A25-AS1-201ENST00000418747 6391 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CHD7Q9P2D1 BCL2L13-203ENST00000355028 4458 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CHD7Q9P2D1 BCAT1-201ENST00000261192 9674 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
CHD7Q9P2D1 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CHD7Q9P2D1 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.54□□□□□ -1.36
CHD7Q9P2D1 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.54□□□□□ -1.36
CHD7Q9P2D1 AC004815.1-201ENST00000484185 331 ntBASIC6.54□□□□□ -1.36
CHD7Q9P2D1 AC106800.3-201ENST00000511389 308 ntBASIC6.54□□□□□ -1.36
CHD7Q9P2D1 AL691477.1-201ENST00000624398 162 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms