Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AL450226.2-201ENST00000622913 439 ntBASIC7.21□□□□□ -1.26
CDK5RAP1Q96SZ6 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC7.21□□□□□ -1.26
CDK5RAP1Q96SZ6 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC7.21□□□□□ -1.26
CDK5RAP1Q96SZ6 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
CDK5RAP1Q96SZ6 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC7.21□□□□□ -1.26
CDK5RAP1Q96SZ6 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.21□□□□□ -1.26
CDK5RAP1Q96SZ6 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CDK5RAP1Q96SZ6 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CDK5RAP1Q96SZ6 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC7.21□□□□□ -1.26
CDK5RAP1Q96SZ6 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC7.21□□□□□ -1.26
CDK5RAP1Q96SZ6 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC7.21□□□□□ -1.26
CDK5RAP1Q96SZ6 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.21□□□□□ -1.26
CDK5RAP1Q96SZ6 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC7.21□□□□□ -1.26
CDK5RAP1Q96SZ6 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.21□□□□□ -1.26
CDK5RAP1Q96SZ6 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CDK5RAP1Q96SZ6 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CDK5RAP1Q96SZ6 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CDK5RAP1Q96SZ6 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CDK5RAP1Q96SZ6 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 AC073342.2-201ENST00000595842 1800 ntBASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 AC020978.6-201ENST00000571197 3177 ntBASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 AC020658.2-201ENST00000559030 4020 ntBASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 CCNB2P1-201ENST00000399411 1150 ntBASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 RPL18AP14-201ENST00000417685 526 ntBASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 MTND4LP7-201ENST00000431728 294 ntBASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 ATP5G1P3-201ENST00000463301 410 ntBASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 AC135721.2-201ENST00000464237 300 ntBASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 MTCO3P28-201ENST00000513351 515 ntBASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 AC131935.1-201ENST00000524621 333 ntBASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 AC010463.3-201ENST00000594077 500 ntBASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 IGKV2OR2-7-201ENST00000604652 304 ntBASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 AC034236.3-201ENST00000605999 461 ntBASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 AC019226.2-201ENST00000625973 424 ntBASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 FBXL21-201ENST00000297158 1305 ntBASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 DLEU2L-201ENST00000371086 3555 ntBASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
CDK5RAP1Q96SZ6 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 RNA5SP382-201ENST00000363355 112 ntBASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 RN7SKP118-201ENST00000364331 330 ntBASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC7.19□□□□□ -1.26
CDK5RAP1Q96SZ6 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms